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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107916968   uncharacterized LOC107916968 
 ghi-r.1   121204913   uncharacterized LOC121204913 
 ath-u.5   AT1G73240   nucleoporin protein Ndc1-Nup protein 
 bra-r.6   103831805   uncharacterized LOC103831805 
 bna-r.1   106354259   uncharacterized LOC106354259 
 bna-r.1   111207075   uncharacterized LOC111207075 
 cit-r.1   102627885   uncharacterized LOC102627885 
 gma-u.5   100800150   uncharacterized LOC100800150 
 gma-u.5   100796588   uncharacterized LOC100796588 
 vvi-u.5   100256014   uncharacterized LOC100256014 
 ppo-u.5   7455768   uncharacterized LOC7455768 
 mtr-u.5   25500152   uncharacterized LOC25500152 
 mtr-u.5   11428584   uncharacterized LOC11428584 
 mtr-u.5   11438321   uncharacterized LOC11438321 
 sly-u.5   101265714   uncharacterized LOC101265714 
 nta-r.1   107830617   uncharacterized LOC107830617 
 nta-r.1   107760475   uncharacterized LOC107760475 
 osa-u.5   4330343   uncharacterized LOC4330343 
 zma-u.5   100278395   uncharacterized LOC100278395 
 zma-u.5   103628806   uncharacterized LOC103628806 
 tae-r.2   123128019   uncharacterized LOC123128019 
 tae-r.2   123145114   uncharacterized LOC123145114 
 tae-r.2   123137799   uncharacterized LOC123137799 
 hvu-r.1   123415204   uncharacterized LOC123415204 
 sbi-r.1   8076023   uncharacterized LOC8076023 
 bdi-r.1   100824084   uncharacterized LOC100824084 
 cre-r.1   CHLRE_03g197550v5   uncharacterized protein 

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Top 50 coexpressed genes to 107916968 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107916968 (ghi-r.1 coexpression data)

CoexMap"107916968"


ghiLOC107916968 | Entrez gene ID : 107916968    
Species ghi ath bra bna cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 2 1 1 2 1 2 1 1 3 1 2 1 2 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03013 [list] [network] Nucleocytoplasmic transport (289 genes)
GO BP
GO:0006999 [list] [network] nuclear pore organization  (9 genes)  IEA  
GO CC
GO:0070762 [list] [network] nuclear pore transmembrane ring  (2 genes)  IEA  
GO MF
GO:0030674 [list] [network] protein-macromolecule adaptor activity  (501 genes)  IEA  
Protein XP_016701840.2 [sequence] [blastp]
XP_016701848.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  nucl_plas 2,  mito 1,  plas 1,  cysk_nucl 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_016701840.2)
nucl 3,  cyto 2,  nucl_plas 2,  mito 1,  plas 1,  cysk_nucl 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for XP_016701848.2)
Subcellular
localization
TargetP
other 4  (predict for XP_016701840.2)
other 4  (predict for XP_016701848.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107916968
ghi-r.1
for
121204913
ath-u.5
for
AT1G73240
bra-r.6
for
103831805
bna-r.1
for
106354259
bna-r.1
for
111207075
cit-r.1
for
102627885
gma-u.5
for
100800150
gma-u.5
for
100796588
vvi-u.5
for
100256014
ppo-u.5
for
7455768
mtr-u.5
for
25500152
mtr-u.5
for
11428584
mtr-u.5
for
11438321
sly-u.5
for
101265714
nta-r.1
for
107830617
nta-r.1
for
107760475
osa-u.5
for
4330343
zma-u.5
for
100278395
zma-u.5
for
103628806
tae-r.2
for
123128019
tae-r.2
for
123145114
tae-r.2
for
123137799
hvu-r.1
for
123415204
sbi-r.1
for
8076023
bdi-r.1
for
100824084
cre-r.1
for
CHLRE_03g197550v5


Ortholog ID: 8310
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr mtr mtr sly nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107916968 LOC121204913 AT1G73240 LOC103831805 LOC106354259 LOC111207075 LOC102627885 LOC100800150 LOC100796588 LOC100256014 LOC7455768 LOC11428584 LOC11438321 LOC25500139 LOC101265714 LOC107830617 LOC107760475 LOC4330343 LOC100278395 LOC103628806 LOC123128019 LOC123145114 LOC123137799 LOC123415204 LOC8076023 LOC100824084 CHLRE_03g197550v5
Function* uncharacterized LOC107916968 uncharacterized LOC121204913 nucleoporin protein Ndc1-Nup protein uncharacterized LOC103831805 uncharacterized LOC106354259 uncharacterized LOC111207075 uncharacterized LOC102627885 uncharacterized LOC100800150 uncharacterized LOC100796588 uncharacterized LOC100256014 uncharacterized LOC7455768 uncharacterized LOC11428584 uncharacterized LOC11438321 uncharacterized LOC25500139 uncharacterized LOC101265714 uncharacterized LOC107830617 uncharacterized LOC107760475 uncharacterized LOC4330343 uncharacterized LOC100278395 uncharacterized LOC103628806 uncharacterized LOC123128019 uncharacterized LOC123145114 uncharacterized LOC123137799 uncharacterized LOC123415204 uncharacterized LOC8076023 uncharacterized LOC100824084 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00514 Other types of O-glycan biosynthesis 2
ghi03013 Nucleocytoplasmic transport 2
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 4
ghi00510 N-Glycan biosynthesis 4
ghi00514 Other types of O-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
bra03013 Nucleocytoplasmic transport 4
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 13
bna03008 Ribosome biogenesis in eukaryotes 4
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 13
bna03008 Ribosome biogenesis in eukaryotes 4
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03013 Nucleocytoplasmic transport 3
cit00510 N-Glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 4
gma00513 Various types of N-glycan biosynthesis 4
gma04141 Protein processing in endoplasmic reticulum 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 4
gma00513 Various types of N-glycan biosynthesis 4
gma04141 Protein processing in endoplasmic reticulum 4
gma03013 Nucleocytoplasmic transport 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo01230 Biosynthesis of amino acids 6
ppo00010 Glycolysis / Gluconeogenesis 5
ppo00710 Carbon fixation by Calvin cycle 4
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 5
mtr03018 RNA degradation 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 6
sly00260 Glycine, serine and threonine metabolism 2
sly00750 Vitamin B6 metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03460 Fanconi anemia pathway 3
zma03440 Homologous recombination 3
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03082 ATP-dependent chromatin remodeling 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi03040 Spliceosome 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 2
cre03082 ATP-dependent chromatin remodeling 2
cre03083 Polycomb repressive complex 2
cre03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107916968 121204913 843658 103831805 106354259 111207075 102627885 100800150 100796588 100256014 7455768 11428584 11438321 25500139 101265714 107830617 107760475 4330343 100278395 103628806 123128019 123145114 123137799 123415204 8076023 100824084 5718784
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