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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107918032   B3 domain-containing protein REM16 
 ghi-r.1   107913126   putative B3 domain-containing protein Os03g0621600 
 ghi-r.1   121229454   B3 domain-containing protein REM16 
 ghi-r.1   107887024   B3 domain-containing protein REM16 
 cit-r.1   102606934   B3 domain-containing protein REM16-like 
 gma-u.5   100777709   B3 domain-containing protein REM16 
 gma-u.5   100813851   B3 domain-containing protein 
 ppo-u.5   7483754   B3 domain-containing protein REM16 
 mtr-u.5   11420401   B3 domain-containing protein REM16 
 mtr-u.5   11414255   B3 domain-containing transcription factor VRN1 
 mtr-u.5   11418171   B3 domain-containing protein REM16 
 sly-u.5   101257140   B3 domain-containing protein REM16-like 
 zma-u.5   100193780   B3 domain-containing protein 
 tae-r.2   123087979   B3 domain-containing protein LOC_Os12g40090 
 tae-r.2   123136499   B3 domain-containing protein LOC_Os12g40090 
 sbi-r.1   8076618   B3 domain-containing protein Os12g0592300 

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Top 50 coexpressed genes to 107918032 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107918032 (ghi-r.1 coexpression data)

CoexMap"107918032"


ghiLOC107918032 | Entrez gene ID : 107918032    
Species ghi cit gma ppo mtr sly zma tae sbi bra sot cre ath nta bna osa hvu vvi bdi
Paralog 4 1 2 1 3 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016703014.1 [sequence] [blastp]
XP_016703015.1 [sequence] [blastp]
XP_016703016.1 [sequence] [blastp]
XP_016703017.1 [sequence] [blastp]
XP_040958017.1 [sequence] [blastp]
XP_040958047.1 [sequence] [blastp]
XP_040958065.1 [sequence] [blastp]
XP_040958095.1 [sequence] [blastp]
XP_040958112.1 [sequence] [blastp]
XP_040958131.1 [sequence] [blastp]
XP_040958151.1 [sequence] [blastp]
XP_040958180.1 [sequence] [blastp]
XP_040958253.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cysk 1,  cyto 1,  pero 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_016703014.1)
nucl 7,  cysk 1,  cyto 1,  pero 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_016703015.1)
nucl 7,  cysk 1,  cyto 1,  pero 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_016703016.1)
nucl 7,  cysk 1,  cyto 1,  pero 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_016703017.1)
nucl 8,  cysk 1  (predict for XP_040958017.1)
nucl 8,  cysk 1  (predict for XP_040958047.1)
nucl 8,  cysk 1  (predict for XP_040958065.1)
nucl 8,  cysk 1  (predict for XP_040958095.1)
nucl 8,  cysk 1  (predict for XP_040958112.1)
nucl 8,  cysk 1  (predict for XP_040958131.1)
nucl 8,  cysk 1  (predict for XP_040958151.1)
nucl 7,  cysk 1,  cyto 1,  pero 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_040958180.1)
nucl 7,  cysk 1,  cyto 1,  pero 1,  cyto_pero 1,  cysk_plas 1  (predict for XP_040958253.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016703014.1)
other 8  (predict for XP_016703015.1)
other 8  (predict for XP_016703016.1)
other 8  (predict for XP_016703017.1)
other 8  (predict for XP_040958017.1)
other 8  (predict for XP_040958047.1)
other 8  (predict for XP_040958065.1)
other 8  (predict for XP_040958095.1)
other 8  (predict for XP_040958112.1)
other 8  (predict for XP_040958131.1)
other 8  (predict for XP_040958151.1)
other 8  (predict for XP_040958180.1)
other 8  (predict for XP_040958253.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107918032
ghi-r.1
for
107913126
ghi-r.1
for
121229454
ghi-r.1
for
107887024
cit-r.1
for
102606934
gma-u.5
for
100777709
gma-u.5
for
100813851
ppo-u.5
for
7483754
mtr-u.5
for
11420401
mtr-u.5
for
11414255
mtr-u.5
for
11418171
sly-u.5
for
101257140
zma-u.5
for
100193780
tae-r.2
for
123087979
tae-r.2
for
123136499
sbi-r.1
for
8076618


Ortholog ID: 3129
Species ghi ghi ghi cit gma gma ppo mtr mtr mtr sly zma sbi
Symbol LOC107913126 LOC121229454 LOC107922557 LOC102606934 LOC100777709 LOC100813851 LOC7483754 LOC11414255 LOC11418171 LOC11419210 LOC101257140 LOC100193780 LOC8076618
Function* putative B3 domain-containing protein Os03g0621600 B3 domain-containing protein REM16 B3 domain-containing protein REM16 B3 domain-containing protein REM16-like B3 domain-containing protein REM16 B3 domain-containing protein B3 domain-containing protein REM16 B3 domain-containing transcription factor VRN1 B3 domain-containing protein REM16 B3 domain-containing protein REM16 B3 domain-containing protein REM16-like B3 domain-containing protein B3 domain-containing protein Os12g0592300
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00100 Steroid biosynthesis 2
ghi04142 Lysosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
gma00620 Pyruvate metabolism 3
gma01240 Biosynthesis of cofactors 3
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00250 Alanine, aspartate and glutamate metabolism 3
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
sbi01230 Biosynthesis of amino acids 4
sbi03010 Ribosome 3
sbi00260 Glycine, serine and threonine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913126 121229454 107922557 102606934 100777709 100813851 7483754 11414255 11418171 11419210 101257140 100193780 8076618
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