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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107898544   F-box protein SKIP23 
 ghi-r.1   107908638   F-box protein SKIP23 
 ghi-r.1   107916858   F-box protein SKIP23 
 bra-r.6   103864581   F-box/kelch-repeat protein At1g64840 
 bra-r.6   103864580   F-box/kelch-repeat protein At1g64840 
 cit-r.1   102629892   F-box protein SKIP23 
 gma-u.5   102666149   F-box protein At2g26160 
 gma-u.5   100781685   F-box protein SKIP23 
 vvi-u.5   100248766   F-box protein SKIP23 
 vvi-u.5   100255655   F-box protein SKIP23-like 
 vvi-u.5   104878343   F-box protein SKIP23-like 
 ppo-u.5   18099109   putative F-box protein At1g65770 
 ppo-u.5   18099111   putative F-box protein At1g65770 
 mtr-u.5   112419917   F-box protein SKIP23 
 mtr-u.5   25499245   F-box protein At4g35733 
 sly-u.5   101249500   F-box protein SKIP23 
 sly-u.5   101249419   F-box protein SKIP23 
 sot-r.1   102601273   F-box protein SKIP23-like 
 nta-r.1   107791639   F-box protein SKIP23 
 nta-r.1   107826340   F-box protein SKIP23-like 

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Top 50 coexpressed genes to 107898544 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107898544 (ghi-r.1 coexpression data)

CoexMap"107919082"


ghiLOC107919082 | Entrez gene ID : 107919082    
Species ghi bra cit gma vvi ppo mtr sly sot nta zma cre sbi ath tae bna osa hvu bdi
Paralog 3 2 1 2 3 2 2 2 1 2 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016704096.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  mito 1,  extr 1,  chlo_mito 1  (predict for XP_016704096.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_016704096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107898544
ghi-r.1
for
107908638
ghi-r.1
for
107916858
bra-r.6
for
103864581
bra-r.6
for
103864580
cit-r.1
for
102629892
gma-u.5
for
102666149
gma-u.5
for
100781685
vvi-u.5
for
100248766
vvi-u.5
for
100255655
vvi-u.5
for
104878343
ppo-u.5
for
18099109
ppo-u.5
for
18099111
mtr-u.5
for
112419917
mtr-u.5
for
25499245
sly-u.5
for
101249500
sly-u.5
for
101249419
sot-r.1
for
102601273
nta-r.1
for
107791639
nta-r.1
for
107826340


Ortholog ID: 260
Species ghi ghi ghi ath bra bra bna cit gma gma vvi vvi vvi ppo ppo sly sly sot nta nta
Symbol LOC107908638 LOC107937847 LOC107944986 AT1G64840 LOC103864581 LOC103864580 LOC106352396 LOC102629892 LOC102666149 LOC100781685 LOC100248766 LOC100255655 LOC104878343 LOC7474974 LOC7496779 LOC101249419 LOC101266597 LOC102601273 LOC107791639 LOC107826340
Function* F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23 LOW protein: F-box/kelch-repeat protein (DUF295) F-box/kelch-repeat protein At1g64840 F-box/kelch-repeat protein At1g64840 F-box/kelch-repeat protein At1g64840-like F-box protein SKIP23 F-box protein At2g26160 F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23-like F-box protein SKIP23-like F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23 F-box protein SKIP23-like F-box protein SKIP23-like F-box protein SKIP23 F-box protein SKIP23-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 4
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 8
ppo04145 Phagosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107908638 107937847 107944986 842792 103864581 103864580 106352396 102629892 102666149 100781685 100248766 100255655 104878343 7474974 7496779 101249419 101266597 102601273 107791639 107826340
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