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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107919728   GDP-L-galactose phosphorylase 2 
 ath-u.5   VTC2   GDP-L-galactose phosphorylase 1 
 ath-u.5   VTC5   GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) 
 gma-u.5   100800738   GDP-L-galactose phosphorylase 1 
 gma-u.5   100806541   GDP-L-galactose phosphorylase 1-like 
 gma-u.5   100785588   GDP-L-galactose phosphorylase 1 
 vvi-u.5   100262099   GDP-L-galactose phosphorylase 1 
 vvi-u.5   100253859   GDP-L-galactose phosphorylase 2 
 ppo-u.5   7483618   GDP-L-galactose phosphorylase 2 
 ppo-u.5   7470803   GDP-L-galactose phosphorylase 1 
 mtr-u.5   25488979   GDP-L-galactose phosphorylase 1 
 mtr-u.5   11423375   GDP-L-galactose phosphorylase 1 
 sly-u.5   GGP2   GDP-L-galactose phosphorylase 
 sly-u.5   GGP1   GDP-L-galactose phosphorylase 1 
 osa-u.5   4351698   GDP-L-galactose phosphorylase 2 
 zma-u.5   100283852   VTC2 

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Top 50 coexpressed genes to 107919728 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107919728 (ghi-r.1 coexpression data)

CoexMap"107919728"


ghiLOC107919728 | Entrez gene ID : 107919728    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00053 [list] [network] Ascorbate and aldarate metabolism (164 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0006006 [list] [network] glucose metabolic process  (114 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0080048 [list] [network] GDP-D-glucose phosphorylase activity  (7 genes)  IEA  
Protein XP_016704602.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  mito 1,  cyto_mito 1  (predict for XP_016704602.2)
Subcellular
localization
TargetP
other 7  (predict for XP_016704602.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107919728
ath-u.5
for
VTC2
ath-u.5
for
VTC5
gma-u.5
for
100800738
gma-u.5
for
100806541
gma-u.5
for
100785588
vvi-u.5
for
100262099
vvi-u.5
for
100253859
ppo-u.5
for
7483618
ppo-u.5
for
7470803
mtr-u.5
for
25488979
mtr-u.5
for
11423375
sly-u.5
for
GGP2
sly-u.5
for
GGP1
osa-u.5
for
4351698
zma-u.5
for
100283852


Ortholog ID: 3252
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta osa zma tae tae hvu hvu sbi bdi bdi cre
Symbol LOC107921993 LOC107932761 VTC5 VTC2 VTC2 LOC103851903 LOC106361354 LOC106418494 LOC102631172 LOC102617187 LOC100806541 LOC100785588 LOC100253859 LOC100262099 LOC7470803 LOC25488979 LOC11423375 GGP2 GGP1 LOC102593176 LOC102596542 LOC107774485 LOC107759279 LOC4351698 LOC100283852 LOC123096339 LOC123110933 LOC123447890 LOC123453136 LOC8084736 LOC100843203 LOC100842186 CHLRE_13g588150v5
Function* GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase VITAMIN C DEFECTIVE 5 (VTC5) GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 2-like GDP-L-galactose phosphorylase 1-like GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 1-like GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase GDP-L-galactose phosphorylase 1 GDP-L-galactose phosphorylase 1-like GDP-L-galactose phosphorylase 1-like GDP-L-galactose phosphorylase 2-like GDP-L-galactose phosphorylase 2-like GDP-L-galactose phosphorylase 2 VTC2 GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 2-like GDP-L-galactose phosphorylase 2-like GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 2 GDP-L-galactose phosphorylase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 6
ghi01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 6
ghi01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 7
ath00380 Tryptophan metabolism 6
ath01210 2-Oxocarboxylic acid metabolism 6
ath00920 Sulfur metabolism 3
ath00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00053 Ascorbate and aldarate metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 4
bna01240 Biosynthesis of cofactors 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
bna00053 Ascorbate and aldarate metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00053 Ascorbate and aldarate metabolism 2
cit00520 Amino sugar and nucleotide sugar metabolism 2
cit01240 Biosynthesis of cofactors 2
cit01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00943 Isoflavonoid biosynthesis 3
gma00053 Ascorbate and aldarate metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo01200 Carbon metabolism 4
ppo00053 Ascorbate and aldarate metabolism 4
ppo00030 Pentose phosphate pathway 3
ppo00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 3
mtr00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr00053 Ascorbate and aldarate metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 3
sly04712 Circadian rhythm - plant 2
sly00053 Ascorbate and aldarate metabolism 2
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00053 Ascorbate and aldarate metabolism 2
nta00600 Sphingolipid metabolism 2
nta04142 Lysosome 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00053 Ascorbate and aldarate metabolism 2
nta00600 Sphingolipid metabolism 2
nta04142 Lysosome 2
nta00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04081 Hormone signaling 2
tae00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00053 Ascorbate and aldarate metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04712 Circadian rhythm - plant 3
tae00230 Purine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 3
sbi04712 Circadian rhythm - plant 2
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 3
bdi04712 Circadian rhythm - plant 3
bdi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
bdi00562 Inositol phosphate metabolism 2
bdi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921993 107932761 835603 828792 103866673 103851903 106361354 106418494 102631172 102617187 100806541 100785588 100253859 100262099 7470803 25488979 11423375 101255942 101055572 102593176 102596542 107774485 107759279 4351698 100283852 123096339 123110933 123447890 123453136 8084736 100843203 100842186 5719447
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