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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107919808   putative RING-type E3 ubiquitin transferase C3H69 
 ghi-r.1   107930101   putative RING-type E3 ubiquitin transferase C3H69 
 ghi-r.1   107926225   putative RING-type E3 ubiquitin transferase C3H69 
 ghi-r.1   107900738   putative RING-type E3 ubiquitin transferase C3H69 
 ath-u.5   AT3G08505   zinc finger (CCCH-type/C3HC4-type RING finger) family protein 
 bra-r.6   103835707   putative RING-type E3 ubiquitin transferase C3H69 
 bra-r.6   103833820   putative RING-type E3 ubiquitin transferase C3H69 
 bra-r.6   103848871   E3 ubiquitin-protein ligase makorin 
 bna-r.1   106377099   putative RING-type E3 ubiquitin transferase C3H69 
 bna-r.1   125577146   putative RING-type E3 ubiquitin transferase C3H69 
 bna-r.1   106388982   E3 ubiquitin-protein ligase makorin 
 cit-r.1   102622382   putative RING-type E3 ubiquitin transferase C3H69 
 gma-u.5   100787817   putative RING-type E3 ubiquitin transferase C3H69 
 gma-u.5   100817071   putative RING-type E3 ubiquitin transferase C3H69 
 vvi-u.5   100243143   putative RING-type E3 ubiquitin transferase C3H69 
 ppo-u.5   112324278   putative RING-type E3 ubiquitin transferase C3H69 
 ppo-u.5   7475062   E3 ubiquitin-protein ligase makorin 
 mtr-u.5   11419599   putative RING-type E3 ubiquitin transferase C3H69 
 sly-u.5   101268612   E3 ubiquitin-protein ligase makorin 
 sly-u.5   101259296   zinc finger transcription factor 57 
 sot-r.1   102605563   zinc finger CCCH domain-containing protein 69-like 
 sot-r.1   102595518   E3 ubiquitin-protein ligase makorin-like 
 nta-r.1   107763121   E3 ubiquitin-protein ligase makorin 
 nta-r.1   107765284   E3 ubiquitin-protein ligase makorin-like 
 nta-r.1   107794489   putative RING-type E3 ubiquitin transferase C3H69 
 osa-u.5   4340884   E3 ubiquitin-protein ligase makorin-like 
 zma-u.5   100279601   uncharacterized LOC100279601 
 zma-u.5   100382879   uncharacterized LOC100382879 
 tae-r.2   123138020   E3 ubiquitin-protein ligase makorin 
 tae-r.2   123164566   E3 ubiquitin-protein ligase makorin 
 tae-r.2   123150632   E3 ubiquitin-protein ligase makorin 
 hvu-r.1   123407228   E3 ubiquitin-protein ligase makorin 
 hvu-r.1   123401652   E3 ubiquitin-protein ligase makorin-like 
 sbi-r.1   110431059   E3 ubiquitin-protein ligase makorin 
 sbi-r.1   8071776   E3 ubiquitin-protein ligase makorin 
 bdi-r.1   100840100   E3 ubiquitin-protein ligase makorin 
 bdi-r.1   100840927   E3 ubiquitin-protein ligase makorin 
 cre-r.1   CHLRE_06g278136v5   uncharacterized protein 

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Top 50 coexpressed genes to 107919808 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107919808 (ghi-r.1 coexpression data)

CoexMap"107919808"


ghiLOC107919808 | Entrez gene ID : 107919808    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 3 3 1 2 1 2 1 2 2 3 1 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_016704665.1 [sequence] [blastp]
XP_016704666.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_016704665.1)
nucl 9,  cyto 1,  mito 1  (predict for XP_016704666.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016704665.1)
other 7  (predict for XP_016704666.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107919808
ghi-r.1
for
107930101
ghi-r.1
for
107926225
ghi-r.1
for
107900738
ath-u.5
for
AT3G08505
bra-r.6
for
103835707
bra-r.6
for
103833820
bra-r.6
for
103848871
bna-r.1
for
106377099
bna-r.1
for
125577146
bna-r.1
for
106388982
cit-r.1
for
102622382
gma-u.5
for
100787817
gma-u.5
for
100817071
vvi-u.5
for
100243143
ppo-u.5
for
112324278
ppo-u.5
for
7475062
mtr-u.5
for
11419599
sly-u.5
for
101268612
sly-u.5
for
101259296
sot-r.1
for
102605563
sot-r.1
for
102595518
nta-r.1
for
107763121
nta-r.1
for
107765284
nta-r.1
for
107794489
osa-u.5
for
4340884
zma-u.5
for
100279601
zma-u.5
for
100382879
tae-r.2
for
123138020
tae-r.2
for
123164566
tae-r.2
for
123150632
hvu-r.1
for
123407228
hvu-r.1
for
123401652
sbi-r.1
for
110431059
sbi-r.1
for
8071776
bdi-r.1
for
100840100
bdi-r.1
for
100840927
cre-r.1
for
CHLRE_06g278136v5


Ortholog ID: 3794
Species ghi ghi ghi ath bra bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107919808 LOC107926225 LOC107900738 AT3G08505 LOC103835707 LOC103848871 LOC103859262 LOC125580422 LOC106396772 LOC106439168 LOC102622382 LOC100787817 LOC100817071 LOC100243143 LOC112324278 LOC7475062 LOC11419599 LOC101268612 LOC101259296 LOC102605563 LOC102595518 LOC107763121 LOC107765284 LOC107794489 LOC4340884 LOC100279601 LOC100382879 LOC123150632 LOC123128203 LOC123145306 LOC123407228 LOC123401652 LOC110431059 LOC8071776 LOC100840100 LOC100840927 CHLRE_06g278136v5
Function* putative RING-type E3 ubiquitin transferase C3H69 putative RING-type E3 ubiquitin transferase C3H69 putative RING-type E3 ubiquitin transferase C3H69 zinc finger (CCCH-type/C3HC4-type RING finger) family protein putative RING-type E3 ubiquitin transferase C3H69 E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin-like putative RING-type E3 ubiquitin transferase C3H69 E3 ubiquitin-protein ligase makorin putative RING-type E3 ubiquitin transferase C3H69 putative RING-type E3 ubiquitin transferase C3H69 putative RING-type E3 ubiquitin transferase C3H69 putative RING-type E3 ubiquitin transferase C3H69 putative RING-type E3 ubiquitin transferase C3H69 E3 ubiquitin-protein ligase makorin putative RING-type E3 ubiquitin transferase C3H69 E3 ubiquitin-protein ligase makorin zinc finger transcription factor 57 zinc finger CCCH domain-containing protein 69-like E3 ubiquitin-protein ligase makorin-like E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin-like putative RING-type E3 ubiquitin transferase C3H69 E3 ubiquitin-protein ligase makorin-like uncharacterized LOC100279601 uncharacterized LOC100382879 E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin-like E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin E3 ubiquitin-protein ligase makorin uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
vvi00561 Glycerolipid metabolism 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03083 Polycomb repressive complex 2
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 2
nta04142 Lysosome 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107919808 107926225 107900738 819998 103835707 103848871 103859262 125580422 106396772 106439168 102622382 100787817 100817071 100243143 112324278 7475062 11419599 101268612 101259296 102605563 102595518 107763121 107765284 107794489 4340884 100279601 100382879 123150632 123128203 123145306 123407228 123401652 110431059 8071776 100840100 100840927 5723656
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