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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107919951   protein CHROMATIN REMODELING 35 
 ath-u.5   DRD1   SNF2 domain-containing protein / helicase domain-containing protein 
 gma-u.5   100780454   protein CHROMATIN REMODELING 35 
 vvi-u.5   100248561   protein CHROMATIN REMODELING 35 
 vvi-u.5   100260281   protein CHROMATIN REMODELING 35 
 vvi-u.5   100243495   protein CHROMATIN REMODELING 35 
 ppo-u.5   7456356   protein CHROMATIN REMODELING 35 
 mtr-u.5   25501071   protein CHROMATIN REMODELING 35 
 mtr-u.5   25488181   protein CHROMATIN REMODELING 35 
 sly-u.5   101266874   protein CHROMATIN REMODELING 35 
 osa-u.5   4343066   protein CHROMATIN REMODELING 35 
 osa-u.5   107277180   protein CHROMATIN REMODELING 35 
 osa-u.5   9272476   protein CHROMATIN REMODELING 35 
 zma-u.5   100277391   Protein CHROMATIN REMODELING 35 
 zma-u.5   103641317   protein CHROMATIN REMODELING 35 

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Top 50 coexpressed genes to 107919951 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107919951 (ghi-r.1 coexpression data)

CoexMap"107919951"


ghiLOC107919951 | Entrez gene ID : 107919951    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 3 1 2 1 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03440 [list] [network] Homologous recombination (106 genes)
GO BP
GO:0080188 [list] [network] gene silencing by siRNA-directed DNA methylation  (35 genes)  IEA  
GO CC
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (93 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016704891.2 [sequence] [blastp]
XP_016704892.2 [sequence] [blastp]
XP_016704893.2 [sequence] [blastp]
XP_040965898.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 2,  cyto 1  (predict for XP_016704891.2)
nucl 6,  chlo 2,  cyto 1  (predict for XP_016704892.2)
nucl 6,  chlo 2,  cyto 1  (predict for XP_016704893.2)
nucl 6,  chlo 2,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_040965898.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_016704891.2)
other 7,  chlo 4  (predict for XP_016704892.2)
other 7,  chlo 4  (predict for XP_016704893.2)
other 7,  chlo 4  (predict for XP_040965898.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107919951
ath-u.5
for
DRD1
gma-u.5
for
100780454
vvi-u.5
for
100248561
vvi-u.5
for
100260281
vvi-u.5
for
100243495
ppo-u.5
for
7456356
mtr-u.5
for
25501071
mtr-u.5
for
25488181
sly-u.5
for
101266874
osa-u.5
for
4343066
osa-u.5
for
107277180
osa-u.5
for
9272476
zma-u.5
for
100277391
zma-u.5
for
103641317


Ortholog ID: 4856
Species ghi ghi ath bra bna bna cit gma vvi vvi ppo mtr mtr sly sot nta nta osa osa zma zma tae tae hvu hvu sbi bdi
Symbol LOC107928073 LOC107945018 DRD1 LOC103860454 LOC106429587 LOC106439846 LOC102625289 LOC100780454 LOC100243495 LOC100260281 LOC7456356 LOC25488181 LOC25501071 LOC101266874 LOC102588195 LOC107822440 LOC107815409 LOC4343066 LOC107277180 LOC100277391 LOC103641317 LOC123104662 LOC123052194 LOC123451768 LOC123425442 LOC8076538 LOC100828181
Function* protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 SNF2 domain-containing protein / helicase domain-containing protein protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35-like protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein chromatin remodeling 35-like protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 Protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35 uncharacterized LOC123104662 uncharacterized LOC123052194 protein CHROMATIN REMODELING 35-like protein CHROMATIN REMODELING 35-like protein CHROMATIN REMODELING 35 protein CHROMATIN REMODELING 35
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
ghi03040 Spliceosome 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma03440 Homologous recombination 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03013 Nucleocytoplasmic transport 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
bdi03060 Protein export 2
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107928073 107945018 816136 103860454 106429587 106439846 102625289 100780454 100243495 100260281 7456356 25488181 25501071 101266874 102588195 107822440 107815409 4343066 107277180 100277391 103641317 123104662 123052194 123451768 123425442 8076538 100828181
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