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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920460   probable E3 ubiquitin-protein ligase ZFP1 
 ath-u.5   AT3G15070   RING/U-box superfamily protein 
 ath-u.5   AT1G53190   RING/U-box superfamily protein 
 gma-u.5   100808611   probable E3 ubiquitin-protein ligase ZFP1 
 gma-u.5   100808448   probable E3 ubiquitin-protein ligase ZFP1 
 vvi-u.5   100251458   uncharacterized LOC100251458 
 vvi-u.5   100264059   probable E3 ubiquitin-protein ligase ZFP1 
 vvi-u.5   100257670   probable E3 ubiquitin-protein ligase ZFP1 
 ppo-u.5   7463788   probable E3 ubiquitin-protein ligase ZFP1 
 ppo-u.5   7487574   probable E3 ubiquitin-protein ligase ZFP1 
 mtr-u.5   25487280   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101263764   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101248221   probable E3 ubiquitin-protein ligase ZFP1 
 sly-u.5   101255962   probable E3 ubiquitin-protein ligase ZFP1 

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Top 50 coexpressed genes to 107920460 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920460 (ghi-r.1 coexpression data)

CoexMap"107920460"


ghiLOC107920460 | Entrez gene ID : 107920460    
Species ghi ath gma vvi ppo mtr sly hvu zma bna cit bra osa sbi bdi nta tae cre sot
Paralog 1 2 2 3 2 1 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016705680.1 [sequence] [blastp]
XP_016705681.1 [sequence] [blastp]
XP_040965037.1 [sequence] [blastp]
XP_040965038.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_016705680.1)
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_016705681.1)
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_040965037.1)
nucl 4,  pero 4,  chlo 1,  cyto 1  (predict for XP_040965038.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016705680.1)
other 8  (predict for XP_016705681.1)
other 8  (predict for XP_040965037.1)
other 8  (predict for XP_040965038.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920460
ath-u.5
for
AT3G15070
ath-u.5
for
AT1G53190
gma-u.5
for
100808611
gma-u.5
for
100808448
vvi-u.5
for
100251458
vvi-u.5
for
100264059
vvi-u.5
for
100257670
ppo-u.5
for
7463788
ppo-u.5
for
7487574
mtr-u.5
for
25487280
sly-u.5
for
101263764
sly-u.5
for
101248221
sly-u.5
for
101255962


Ortholog ID: 3221
Species ghi ghi ath ath bra bra bna bna cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta
Symbol LOC107920460 LOC121209430 AT3G15070 AT1G53190 LOC103869959 LOC103868448 LOC106451456 LOC111215704 LOC102621766 LOC100808448 LOC100779069 LOC100246312 LOC100251458 LOC7487574 LOC7463788 LOC25487280 LOC101255962 LOC101263764 LOC102580795 LOC102588519 LOC107777037 LOC107770723
Function* probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase HIP1 probable E3 ubiquitin-protein ligase ZFP1 hypothetical protein probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 uncharacterized LOC100251458 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase ZFP1 probable E3 ubiquitin-protein ligase HIP1 uncharacterized LOC102588519 putative E3 ubiquitin-protein ligase ZFP1 putative E3 ubiquitin-protein ligase ZFP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 3
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00562 Inositol phosphate metabolism 2
sly04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920460 121209430 820736 841753 103869959 103868448 106451456 111215704 102621766 100808448 100779069 100246312 100251458 7487574 7463788 25487280 101255962 101263764 102580795 102588519 107777037 107770723
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