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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920584   tubulin alpha chain 
 ghi-r.1   107898604   uncharacterized LOC107898604 
 ghi-r.1   107917837   uncharacterized LOC107917837 
 ghi-r.1   107922200   uncharacterized LOC107922200 
 ath-u.5   AT5G55610   isopentenyl-diphosphate delta-isomerase 
 bra-r.6   103851870   uncharacterized LOC103851870 
 bra-r.6   103845006   uncharacterized LOC103845006 
 bna-r.1   106389796   uncharacterized LOC106389796 
 bna-r.1   BNAC02G12900D   uncharacterized BNAC02G12900D 
 bna-r.1   BNAA10G09780D   uncharacterized BNAA10G09780D 
 cit-r.1   102614039   uncharacterized LOC102614039 
 gma-u.5   100808514   uncharacterized LOC100808514 
 gma-u.5   100807129   uncharacterized LOC100807129 
 vvi-u.5   100241265   uncharacterized LOC100241265 
 ppo-u.5   7487535   uncharacterized LOC7487535 
 mtr-u.5   11441423   uncharacterized LOC11441423 
 mtr-u.5   11428426   uncharacterized LOC11428426 
 sly-u.5   101252170   uncharacterized LOC101252170 
 sot-r.1   102605305   uncharacterized LOC102605305 
 sot-r.1   102588020   uncharacterized LOC102588020 
 nta-r.1   107776877   uncharacterized LOC107776877 
 nta-r.1   107772810   uncharacterized LOC107772810 
 osa-u.5   4352266   uncharacterized LOC4352266 
 zma-u.5   100276490   uncharacterized LOC100276490 
 tae-r.2   123110989   uncharacterized LOC123110989 
 tae-r.2   123102770   uncharacterized LOC123102770 
 tae-r.2   123119976   uncharacterized LOC123119976 
 hvu-r.1   123395644   uncharacterized LOC123395644 
 sbi-r.1   8063297   uncharacterized LOC8063297 
 bdi-r.1   100835754   uncharacterized LOC100835754 
 cre-r.1   CHLRE_13g584950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107920584 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920584 (ghi-r.1 coexpression data)

CoexMap"107920584"


ghiLOC107920584 | Entrez gene ID : 107920584    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 2 1 1 2 1 2 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000226 [list] [network] microtubule cytoskeleton organization  (375 genes)  IEA  
GO:0000278 [list] [network] mitotic cell cycle  (541 genes)  IEA  
GO CC
GO:0005874 [list] [network] microtubule  (337 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0005200 [list] [network] structural constituent of cytoskeleton  (83 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (687 genes)  IEA  
Protein XP_016705853.2 [sequence] [blastp]
XP_016705854.2 [sequence] [blastp]
XP_016705855.1 [sequence] [blastp]
XP_016705857.1 [sequence] [blastp]
XP_040964940.1 [sequence] [blastp]
XP_040964941.1 [sequence] [blastp]
XP_040964942.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  chlo 2,  golg 2,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016705853.2)
vacu 3,  chlo 2,  golg 2,  nucl 1,  cyto 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016705854.2)
chlo 5,  cyto 4  (predict for XP_016705855.1)
chlo 5,  cyto 4  (predict for XP_016705857.1)
chlo 6,  extr 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040964940.1)
chlo 6,  extr 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040964941.1)
chlo 6,  extr 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040964942.1)
Subcellular
localization
TargetP
scret 5,  other 5  (predict for XP_016705853.2)
scret 5,  other 5  (predict for XP_016705854.2)
other 7  (predict for XP_016705855.1)
other 7  (predict for XP_016705857.1)
scret 6,  other 3  (predict for XP_040964940.1)
scret 6,  other 3  (predict for XP_040964941.1)
scret 6,  other 3  (predict for XP_040964942.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920584
ghi-r.1
for
107898604
ghi-r.1
for
107917837
ghi-r.1
for
107922200
ath-u.5
for
AT5G55610
bra-r.6
for
103851870
bra-r.6
for
103845006
bna-r.1
for
106389796
bna-r.1
for
BNAC02G12900D
bna-r.1
for
BNAA10G09780D
cit-r.1
for
102614039
gma-u.5
for
100808514
gma-u.5
for
100807129
vvi-u.5
for
100241265
ppo-u.5
for
7487535
mtr-u.5
for
11441423
mtr-u.5
for
11428426
sly-u.5
for
101252170
sot-r.1
for
102605305
sot-r.1
for
102588020
nta-r.1
for
107776877
nta-r.1
for
107772810
osa-u.5
for
4352266
zma-u.5
for
100276490
tae-r.2
for
123110989
tae-r.2
for
123102770
tae-r.2
for
123119976
hvu-r.1
for
123395644
sbi-r.1
for
8063297
bdi-r.1
for
100835754
cre-r.1
for
CHLRE_13g584950v5


Ortholog ID: 6380
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo mtr mtr sly sot sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107920584 LOC107917837 LOC107922200 AT5G55610 LOC103851870 LOC103845006 LOC106389796 BNAC02G12900D BNAA10G09780D LOC102614039 LOC100808514 LOC100807129 LOC100241265 LOC7487535 LOC11441423 LOC11428426 LOC101252170 LOC102605305 LOC102588020 LOC107776877 LOC107772810 LOC4352266 LOC100276490 LOC123110989 LOC123102770 LOC123119976 LOC123395644 LOC8063297 LOC100835754 CHLRE_13g584950v5
Function* tubulin alpha chain uncharacterized LOC107917837 uncharacterized LOC107922200 isopentenyl-diphosphate delta-isomerase uncharacterized LOC103851870 uncharacterized LOC103845006 uncharacterized LOC106389796 uncharacterized BNAC02G12900D uncharacterized BNAA10G09780D uncharacterized LOC102614039 uncharacterized LOC100808514 uncharacterized LOC100807129 uncharacterized LOC100241265 uncharacterized LOC7487535 uncharacterized LOC11441423 uncharacterized LOC11428426 uncharacterized LOC101252170 uncharacterized LOC102605305 uncharacterized LOC102588020 uncharacterized LOC107776877 uncharacterized LOC107772810 uncharacterized LOC4352266 uncharacterized LOC100276490 uncharacterized LOC123110989 uncharacterized LOC123102770 uncharacterized LOC123119976 uncharacterized LOC123395644 uncharacterized LOC8063297 uncharacterized LOC100835754 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00300 Lysine biosynthesis 2
ghi00470 D-Amino acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00020 Citrate cycle (TCA cycle) 4
ath00010 Glycolysis / Gluconeogenesis 3
ath01250 Biosynthesis of nucleotide sugars 3
ath01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 8
bra01200 Carbon metabolism 5
bra00020 Citrate cycle (TCA cycle) 4
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
bra00020 Citrate cycle (TCA cycle) 5
bra01200 Carbon metabolism 5
bra01210 2-Oxocarboxylic acid metabolism 3
bra00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
gma01230 Biosynthesis of amino acids 3
gma00270 Cysteine and methionine metabolism 2
gma00480 Glutathione metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
gma01240 Biosynthesis of cofactors 3
gma00020 Citrate cycle (TCA cycle) 3
gma01200 Carbon metabolism 3
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 7
vvi00020 Citrate cycle (TCA cycle) 2
vvi01200 Carbon metabolism 2
vvi03010 Ribosome 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00270 Cysteine and methionine metabolism 2
ppo00566 Sulfoquinovose metabolism 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 4
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03420 Nucleotide excision repair 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta01230 Biosynthesis of amino acids 3
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 7
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 8
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 8
tae04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 3
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 8
bdi00190 Oxidative phosphorylation 6
bdi00020 Citrate cycle (TCA cycle) 6
bdi01210 2-Oxocarboxylic acid metabolism 5
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920584 107917837 107922200 835655 103851870 103845006 106389796 106380887 106371400 102614039 100808514 100807129 100241265 7487535 11441423 11428426 101252170 102605305 102588020 107776877 107772810 4352266 100276490 123110989 123102770 123119976 123395644 8063297 100835754 66056035
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