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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107920685   tobamovirus multiplication protein 1 
 ath-u.5   Cand3   tobamovirus multiplication protein 
 gma-u.5   100819031   tobamovirus multiplication protein 1 
 gma-u.5   100790769   tobamovirus multiplication protein 1 
 vvi-u.5   100250429   tobamovirus multiplication protein 1 
 ppo-u.5   7480723   tobamovirus multiplication protein 1 
 ppo-u.5   7464649   tobamovirus multiplication protein 1 
 mtr-u.5   11437051   tobamovirus multiplication protein 1 
 mtr-u.5   11405282   tobamovirus multiplication protein 1 
 sly-u.5   101266786   tobamovirus multiplication protein 1 
 osa-u.5   4324631   tobamovirus multiplication protein 1 
 zma-u.5   100191812   uncharacterized LOC100191812 

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Top 50 coexpressed genes to 107920685 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107920685 (ghi-r.1 coexpression data)

CoexMap"107920685"


ghiLOC107920685 | Entrez gene ID : 107920685    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016705988.1 [sequence] [blastp]
XP_016705989.1 [sequence] [blastp]
XP_016705990.1 [sequence] [blastp]
XP_016705991.1 [sequence] [blastp]
XP_040973521.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  golg 2,  chlo 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_016705988.1)
plas 4,  golg 3,  E.R._plas 3  (predict for XP_016705989.1)
plas 5,  golg 2,  chlo 1,  vacu 1,  E.R. 1,  chlo_mito 1,  E.R._vacu 1  (predict for XP_016705990.1)
plas 5,  golg 2,  E.R. 1,  chlo 1,  vacu 1,  cyto_E.R. 1  (predict for XP_016705991.1)
golg_plas 4,  plas 4,  golg 4,  E.R. 1  (predict for XP_040973521.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016705988.1)
scret 9  (predict for XP_016705989.1)
scret 9  (predict for XP_016705990.1)
scret 9  (predict for XP_016705991.1)
scret 9  (predict for XP_040973521.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107920685
ath-u.5
for
Cand3
gma-u.5
for
100819031
gma-u.5
for
100790769
vvi-u.5
for
100250429
ppo-u.5
for
7480723
ppo-u.5
for
7464649
mtr-u.5
for
11437051
mtr-u.5
for
11405282
sly-u.5
for
101266786
osa-u.5
for
4324631
zma-u.5
for
100191812


Ortholog ID: 6908
Species ghi ghi ath bra bra bna bna cit cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107920685 LOC107913774 Cand3 LOC103830195 LOC103841770 LOC106353167 LOC106368316 LOC102615433 LOC102623683 LOC100819031 LOC100790769 LOC100250429 LOC7480723 LOC7464649 LOC11405282 LOC11437051 LOC101266786 LOC102592102 LOC107814012 LOC107815596 LOC4324631 LOC100191812 LOC123079181 LOC123062068 LOC123444420 LOC8075583 LOC104582863
Function* tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1-like tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 uncharacterized LOC100191812 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1 tobamovirus multiplication protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
gma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00908 Zeatin biosynthesis 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00770 Pantothenate and CoA biosynthesis 2
nta00330 Arginine and proline metabolism 2
nta00908 Zeatin biosynthesis 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03250 Viral life cycle - HIV-1 2
osa03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107920685 107913774 825078 103830195 103841770 106353167 106368316 102615433 102623683 100819031 100790769 100250429 7480723 7464649 11405282 11437051 101266786 102592102 107814012 107815596 4324631 100191812 123079181 123062068 123444420 8075583 104582863
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