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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922330   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 ath-u.5   LpxC1   UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 
 ath-u.5   LpxC3   UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 
 ath-u.5   LpxC5   UDP-3-O-acyl N-acetylglycosamine deacetylase family protein 
 gma-u.5   100814465   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 vvi-u.5   100266270   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 ppo-u.5   7462673   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 mtr-u.5   25482546   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 sly-u.5   101261245   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 osa-u.5   4332110   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 
 zma-u.5   103644520   probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial 

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Top 50 coexpressed genes to 107922330 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922330 (ghi-r.1 coexpression data)

CoexMap"107922330"


ghiLOC107922330 | Entrez gene ID : 107922330    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00540 [list] [network] Lipopolysaccharide biosynthesis (17 genes)
GO BP
GO:0009245 [list] [network] lipid A biosynthetic process  (14 genes)  IEA  
GO CC
GO MF
Protein XP_016707807.2 [sequence] [blastp]
XP_016707808.2 [sequence] [blastp]
XP_016707809.2 [sequence] [blastp]
XP_016707810.2 [sequence] [blastp]
XP_016707811.2 [sequence] [blastp]
XP_040942188.1 [sequence] [blastp]
XP_040942190.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_016707807.2)
chlo 3,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_016707808.2)
chlo 4,  nucl 4,  mito 1  (predict for XP_016707809.2)
cyto 4,  cysk 3,  chlo 1,  nucl 1,  cysk_plas 1  (predict for XP_016707810.2)
chlo 4,  nucl 3,  chlo_mito 3  (predict for XP_016707811.2)
chlo 3,  nucl 3,  cyto 2,  chlo_mito 2  (predict for XP_040942188.1)
cysk 4,  cyto 2,  cysk_plas 2,  chlo 1,  nucl 1  (predict for XP_040942190.1)
Subcellular
localization
TargetP
chlo 2  (predict for XP_016707807.2)
chlo 2  (predict for XP_016707808.2)
chlo 2  (predict for XP_016707809.2)
other 8  (predict for XP_016707810.2)
chlo 2  (predict for XP_016707811.2)
chlo 2  (predict for XP_040942188.1)
other 8  (predict for XP_040942190.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922330
ath-u.5
for
LpxC1
ath-u.5
for
LpxC3
ath-u.5
for
LpxC5
gma-u.5
for
100814465
vvi-u.5
for
100266270
ppo-u.5
for
7462673
mtr-u.5
for
25482546
sly-u.5
for
101261245
osa-u.5
for
4332110
zma-u.5
for
103644520


Ortholog ID: 6713
Species ghi ghi ath ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107915281 LOC107915356 LpxC1 LpxC3 LOC103835438 LOC111199800 LOC106361940 LOC102629631 LOC100814465 LOC100266270 LOC7462673 LOC25482546 LOC101261245 LOC102586771 LOC107782186 LOC142181243 LOC4332110 LOC103644520 LOC123085128 LOC123098197 LOC123449271 LOC8085274 LOC100840183 CHLRE_16g653350v5
Function* probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial mitochondrial pyruvate carrier 3 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein UDP-3-O-acyl N-acetylglycosamine deacetylase family protein probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 putative UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial putative UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2 probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 2, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00540 Lipopolysaccharide biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00540 Lipopolysaccharide biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna03040 Spliceosome 2
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 3
sot03013 Nucleocytoplasmic transport 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03040 Spliceosome 3
nta04120 Ubiquitin mediated proteolysis 3
nta00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
nta00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa00640 Propanoate metabolism 2
osa00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma03013 Nucleocytoplasmic transport 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03083 Polycomb repressive complex 3
tae04712 Circadian rhythm - plant 3
tae00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre01240 Biosynthesis of cofactors 2
cre03008 Ribosome biogenesis in eukaryotes 2
cre00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107915281 107915356 839084 839094 103835438 111199800 106361940 102629631 100814465 100266270 7462673 25482546 101261245 102586771 107782186 142181243 4332110 103644520 123085128 123098197 123449271 8085274 100840183 5723773
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