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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922452   ribonucleoside-diphosphate reductase large subunit 
 ghi-r.1   107950594   ribonucleoside-diphosphate reductase large subunit 
 ghi-r.1   107890889   ribonucleoside-diphosphate reductase large subunit 
 ghi-r.1   107925060   ribonucleoside-diphosphate reductase large subunit 
 ath-u.5   RNR1   ribonucleotide reductase 1 
 bra-r.6   103847573   ribonucleoside-diphosphate reductase large subunit 
 bra-r.6   103835128   ribonucleoside-diphosphate reductase large subunit 
 bra-r.6   103827773   ribonucleoside-diphosphate reductase large subunit 
 bna-r.1   111208734   ribonucleoside-diphosphate reductase large subunit 
 bna-r.1   111198774   ribonucleoside-diphosphate reductase large subunit 
 cit-r.1   102621651   ribonucleoside-diphosphate reductase large subunit-like 
 cit-r.1   102611797   ribonucleoside-diphosphate reductase large subunit-like 
 cit-r.1   102612388   ribonucleoside-diphosphate reductase large subunit 
 gma-u.5   547948   ribonucleotide reductase large subunit B 
 gma-u.5   548020   ribonucleoside-diphosphate reductase large subunit 
 gma-u.5   100791639   ribonucleoside-diphosphate reductase large subunit 
 vvi-u.5   100261117   ribonucleoside-diphosphate reductase large subunit 
 ppo-u.5   7457154   ribonucleoside-diphosphate reductase large subunit 
 ppo-u.5   7469236   ribonucleoside-diphosphate reductase large subunit 
 ppo-u.5   7486350   ribonucleoside-diphosphate reductase large subunit 
 mtr-u.5   11438405   ribonucleoside-diphosphate reductase large subunit 
 mtr-u.5   25488510   ribonucleoside-diphosphate reductase large subunit 
 sly-u.5   101263997   ribonucleoside-diphosphate reductase large subunit 
 sly-u.5   101249065   ribonucleoside-diphosphate reductase large subunit-like 
 sot-r.1   102585367   ribonucleoside-diphosphate reductase large subunit-like 
 sot-r.1   102602086   ribonucleoside-diphosphate reductase large subunit 
 nta-r.1   107807190   ribonucleoside-diphosphate reductase large subunit-like 
 nta-r.1   107803584   ribonucleoside-diphosphate reductase large subunit 
 nta-r.1   107770366   ribonucleoside-diphosphate reductase large subunit 
 osa-u.5   4340258   ribonucleoside-diphosphate reductase large subunit 
 osa-u.5   4331059   ribonucleoside-diphosphate reductase large subunit 
 zma-u.5   110017794   uncharacterized LOC110017794 
 zma-u.5   100502278   Ribonucleoside-diphosphate reductase 
 tae-r.2   123146011   ribonucleoside-diphosphate reductase large subunit 
 tae-r.2   123165206   ribonucleoside-diphosphate reductase large subunit 
 tae-r.2   123149004   ribonucleoside-diphosphate reductase large subunit 
 hvu-r.1   123401811   ribonucleoside-diphosphate reductase large subunit 
 hvu-r.1   123407082   ribonucleoside-diphosphate reductase large subunit-like 
 sbi-r.1   8070903   ribonucleoside-diphosphate reductase large subunit 
 sbi-r.1   8084665   ribonucleoside-diphosphate reductase large subunit 
 bdi-r.1   100839518   ribonucleoside-diphosphate reductase large subunit 
 bdi-r.1   100844446   ribonucleoside-diphosphate reductase large subunit 
 cre-r.1   CHLRE_12g492950v5   uncharacterized protein 

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Top 50 coexpressed genes to 107922452 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922452 (ghi-r.1 coexpression data)

CoexMap"107922452"


ghiLOC107922452 | Entrez gene ID : 107922452    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 3 2 3 3 1 3 2 2 2 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00230 [list] [network] Purine metabolism (224 genes)
ghi00240 [list] [network] Pyrimidine metabolism (157 genes)
ghi00480 [list] [network] Glutathione metabolism (226 genes)
ghi01232 [list] [network] Nucleotide metabolism (202 genes)
GO BP
GO:0009263 [list] [network] deoxyribonucleotide biosynthetic process  (21 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (259 genes)  IEA  
GO CC
GO:0005971 [list] [network] ribonucleoside-diphosphate reductase complex  (4 genes)  IEA  
GO MF
GO:0004748 [list] [network] ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor  (4 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016707988.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  cyto_pero 3  (predict for XP_016707988.1)
Subcellular
localization
TargetP
other 8,  mito 3  (predict for XP_016707988.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922452
ghi-r.1
for
107950594
ghi-r.1
for
107890889
ghi-r.1
for
107925060
ath-u.5
for
RNR1
bra-r.6
for
103847573
bra-r.6
for
103835128
bra-r.6
for
103827773
bna-r.1
for
111208734
bna-r.1
for
111198774
cit-r.1
for
102621651
cit-r.1
for
102611797
cit-r.1
for
102612388
gma-u.5
for
547948
gma-u.5
for
548020
gma-u.5
for
100791639
vvi-u.5
for
100261117
ppo-u.5
for
7457154
ppo-u.5
for
7469236
ppo-u.5
for
7486350
mtr-u.5
for
11438405
mtr-u.5
for
25488510
sly-u.5
for
101263997
sly-u.5
for
101249065
sot-r.1
for
102585367
sot-r.1
for
102602086
nta-r.1
for
107807190
nta-r.1
for
107803584
nta-r.1
for
107770366
osa-u.5
for
4340258
osa-u.5
for
4331059
zma-u.5
for
110017794
zma-u.5
for
100502278
tae-r.2
for
123146011
tae-r.2
for
123165206
tae-r.2
for
123149004
hvu-r.1
for
123401811
hvu-r.1
for
123407082
sbi-r.1
for
8070903
sbi-r.1
for
8084665
bdi-r.1
for
100839518
bdi-r.1
for
100844446
cre-r.1
for
CHLRE_12g492950v5


Ortholog ID: 3427
Species ghi ghi ghi ath bra bra bra bna bna cit cit cit gma gma gma vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107922452 LOC107950594 LOC107925060 RNR1 LOC103847573 LOC103835128 LOC103827773 LOC111208734 LOC111198774 LOC102621651 LOC102611797 LOC102612388 LOC547948 LOC548020 LOC100791639 LOC100261117 LOC7457154 LOC7469236 LOC7486350 LOC11438405 LOC25488510 LOC101263997 LOC101249065 LOC102585367 LOC102602086 LOC107807190 LOC107803584 LOC107829206 LOC4340258 LOC4331059 LOC110017794 LOC100502278 LOC123146011 LOC123165206 LOC123156757 LOC123401811 LOC123407082 LOC8070903 LOC8084665 LOC100839518 LOC100844446 CHLRE_12g492950v5
Function* ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleotide reductase 1 ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleotide reductase large subunit B ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit uncharacterized LOC110017794 Ribonucleoside-diphosphate reductase ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit-like ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit ribonucleoside-diphosphate reductase large subunit uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 6
ghi01232 Nucleotide metabolism 6
ghi00230 Purine metabolism 4
ghi00480 Glutathione metabolism 4
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 7
ghi01232 Nucleotide metabolism 7
ghi00230 Purine metabolism 5
ghi00480 Glutathione metabolism 5
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 5
ghi01232 Nucleotide metabolism 5
ghi00230 Purine metabolism 4
ghi00480 Glutathione metabolism 4
ghi03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 11
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 11
bra00240 Pyrimidine metabolism 3
bra01232 Nucleotide metabolism 3
bra03420 Nucleotide excision repair 2
bra03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 4
bra04120 Ubiquitin mediated proteolysis 2
bra00230 Purine metabolism 2
bra00240 Pyrimidine metabolism 2
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03460 Fanconi anemia pathway 4
bna00230 Purine metabolism 4
bna00240 Pyrimidine metabolism 4
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 5
bna01232 Nucleotide metabolism 5
bna03440 Homologous recombination 4
bna00230 Purine metabolism 4
bna00480 Glutathione metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 8
cit04814 Motor proteins 2
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 3
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
gma00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 6
gma03440 Homologous recombination 3
gma03460 Fanconi anemia pathway 3
gma00240 Pyrimidine metabolism 3
gma01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 5
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma00240 Pyrimidine metabolism 4
gma01232 Nucleotide metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
vvi04814 Motor proteins 2
vvi03420 Nucleotide excision repair 2
vvi03430 Mismatch repair 2
vvi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 7
ppo00240 Pyrimidine metabolism 4
ppo01232 Nucleotide metabolism 4
ppo00230 Purine metabolism 3
ppo00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
mtr00230 Purine metabolism 2
mtr00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 5
mtr00240 Pyrimidine metabolism 5
mtr00480 Glutathione metabolism 5
mtr01232 Nucleotide metabolism 5
mtr03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly00230 Purine metabolism 2
sly00480 Glutathione metabolism 2
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 8
sly00240 Pyrimidine metabolism 3
sly01232 Nucleotide metabolism 3
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
sot03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 4
sot03420 Nucleotide excision repair 4
sot03430 Mismatch repair 4
sot03460 Fanconi anemia pathway 4
sot03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 6
nta01232 Nucleotide metabolism 6
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 7
nta01232 Nucleotide metabolism 7
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 6
nta01232 Nucleotide metabolism 6
nta00230 Purine metabolism 5
nta00480 Glutathione metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 5
osa01232 Nucleotide metabolism 5
osa00230 Purine metabolism 4
osa00480 Glutathione metabolism 4
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 5
osa01232 Nucleotide metabolism 5
osa00230 Purine metabolism 4
osa00480 Glutathione metabolism 4
osa03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 11
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 5
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma00480 Glutathione metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 5
tae00240 Pyrimidine metabolism 5
tae00480 Glutathione metabolism 5
tae01232 Nucleotide metabolism 5
tae03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 10
tae00230 Purine metabolism 6
tae00240 Pyrimidine metabolism 6
tae00480 Glutathione metabolism 6
tae01232 Nucleotide metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
hvu01230 Biosynthesis of amino acids 2
hvu04146 Peroxisome 2
hvu00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 11
hvu03030 DNA replication 4
hvu04120 Ubiquitin mediated proteolysis 3
hvu03420 Nucleotide excision repair 2
hvu03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 5
sbi00240 Pyrimidine metabolism 3
sbi01232 Nucleotide metabolism 3
sbi00230 Purine metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 3
sbi01232 Nucleotide metabolism 3
sbi03030 DNA replication 2
sbi00230 Purine metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 7
cre00240 Pyrimidine metabolism 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
cre01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922452 107950594 107925060 816715 103847573 103835128 103827773 111208734 111198774 102621651 102611797 102612388 547948 548020 100791639 100261117 7457154 7469236 7486350 11438405 25488510 101263997 101249065 102585367 102602086 107807190 107803584 107829206 4340258 4331059 110017794 100502278 123146011 123165206 123156757 123401811 123407082 8070903 8084665 100839518 100844446 5726125
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