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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922568   triosephosphate isomerase, chloroplastic 
 ghi-r.1   107949084   triosephosphate isomerase, chloroplastic-like 
 ghi-r.1   107916706   triosephosphate isomerase, chloroplastic 
 ghi-r.1   107898584   triosephosphate isomerase, chloroplastic 
 ath-u.5   TIM   triosephosphate isomerase 
 bra-r.6   103842552   triosephosphate isomerase, chloroplastic 
 bra-r.6   103864252   triosephosphate isomerase, chloroplastic 
 bna-r.1   106420738   triosephosphate isomerase, chloroplastic 
 bna-r.1   106415572   triosephosphate isomerase, chloroplastic-like 
 bna-r.1   125607974   triosephosphate isomerase, chloroplastic-like 
 cit-r.1   102617521   triosephosphate isomerase, chloroplastic 
 gma-u.5   100819824   triosephosphate isomerase, chloroplastic 
 gma-u.5   100812398   triosephosphate isomerase, chloroplastic 
 gma-u.5   100799358   triosephosphate isomerase, chloroplastic-like 
 vvi-u.5   100260576   triosephosphate isomerase, chloroplastic 
 ppo-u.5   7453631   triosephosphate isomerase, chloroplastic 
 ppo-u.5   7494267   triosephosphate isomerase, chloroplastic 
 mtr-u.5   25499344   triosephosphate isomerase, chloroplastic 
 sly-u.5   101250846   triosephosphate isomerase, chloroplastic 
 sly-u.5   101246286   triosephosphate isomerase, chloroplastic 
 sot-r.1   102583463   triosephosphate isomerase, chloroplastic 
 sot-r.1   102601486   triosephosphate isomerase, chloroplastic-like 
 nta-r.1   107806500   triosephosphate isomerase, chloroplastic-like 
 nta-r.1   107769721   triosephosphate isomerase, chloroplastic-like 
 nta-r.1   107764979   triosephosphate isomerase, chloroplastic-like 
 osa-u.5   4347691   triosephosphate isomerase, chloroplastic 
 zma-u.5   100191222   Triosephosphate isomerase 
 zma-u.5   100193000   uncharacterized LOC100193000 
 tae-r.2   123122343   triosephosphate isomerase, chloroplastic 
 tae-r.2   123104574   triosephosphate isomerase, chloroplastic 
 tae-r.2   123112845   triosephosphate isomerase, chloroplastic 
 hvu-r.1   123400115   triosephosphate isomerase, chloroplastic 
 sbi-r.1   8063311   triosephosphate isomerase, chloroplastic 
 bdi-r.1   100829343   triosephosphate isomerase, chloroplastic 
 cre-r.1   CHLRE_01g029300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107922568 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922568 (ghi-r.1 coexpression data)

CoexMap"107922568"


ghiLOC107922568 | Entrez gene ID : 107922568    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 1 3 1 2 1 2 2 3 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00010 [list] [network] Glycolysis / Gluconeogenesis (341 genes)
ghi00051 [list] [network] Fructose and mannose metabolism (138 genes)
ghi00562 [list] [network] Inositol phosphate metabolism (196 genes)
ghi00710 [list] [network] Carbon fixation by Calvin cycle (194 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0046166 [list] [network] glyceraldehyde-3-phosphate biosynthetic process  (12 genes)  IEA  
GO:0019563 [list] [network] glycerol catabolic process  (16 genes)  IEA  
GO:0006094 [list] [network] gluconeogenesis  (44 genes)  IEA  
GO:0006096 [list] [network] glycolytic process  (143 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0004807 [list] [network] triose-phosphate isomerase activity  (12 genes)  IEA  
Protein XP_016708147.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_016708147.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016708147.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922568
ghi-r.1
for
107949084
ghi-r.1
for
107916706
ghi-r.1
for
107898584
ath-u.5
for
TIM
bra-r.6
for
103842552
bra-r.6
for
103864252
bna-r.1
for
106420738
bna-r.1
for
106415572
bna-r.1
for
125607974
cit-r.1
for
102617521
gma-u.5
for
100819824
gma-u.5
for
100812398
gma-u.5
for
100799358
vvi-u.5
for
100260576
ppo-u.5
for
7453631
ppo-u.5
for
7494267
mtr-u.5
for
25499344
sly-u.5
for
101250846
sly-u.5
for
101246286
sot-r.1
for
102583463
sot-r.1
for
102601486
nta-r.1
for
107806500
nta-r.1
for
107769721
nta-r.1
for
107764979
osa-u.5
for
4347691
zma-u.5
for
100191222
zma-u.5
for
100193000
tae-r.2
for
123122343
tae-r.2
for
123104574
tae-r.2
for
123112845
hvu-r.1
for
123400115
sbi-r.1
for
8063311
bdi-r.1
for
100829343
cre-r.1
for
CHLRE_01g029300v5


Ortholog ID: 5259
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107922568 LOC107949084 LOC107916706 TIM LOC103842552 LOC103864252 LOC106420738 LOC125607974 LOC106368808 LOC102617521 LOC100819824 LOC100812398 LOC100799358 LOC100260576 LOC7453631 LOC7494267 LOC25499344 LOC101250846 LOC101246286 LOC102583463 LOC102601486 LOC107806500 LOC107769721 LOC107760622 LOC4347691 LOC100191222 LOC100193000 LOC123122343 LOC123104574 LOC123112845 LOC123400115 LOC8063311 LOC100829343 CHLRE_01g029300v5
Function* triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic-like triosephosphate isomerase, chloroplastic triosephosphate isomerase triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic-like triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic-like triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic-like triosephosphate isomerase, chloroplastic-like triosephosphate isomerase, chloroplastic-like triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic Triosephosphate isomerase uncharacterized LOC100193000 triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic triosephosphate isomerase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00710 Carbon fixation by Calvin cycle 6
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00051 Fructose and mannose metabolism 4
ghi00562 Inositol phosphate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00051 Fructose and mannose metabolism 4
ghi00562 Inositol phosphate metabolism 4
ghi00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 7
ghi00010 Glycolysis / Gluconeogenesis 4
ghi00051 Fructose and mannose metabolism 4
ghi00562 Inositol phosphate metabolism 4
ghi00710 Carbon fixation by Calvin cycle 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 7
ath01200 Carbon metabolism 6
ath00710 Carbon fixation by Calvin cycle 4
ath00010 Glycolysis / Gluconeogenesis 3
ath00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 6
bra01230 Biosynthesis of amino acids 6
bra00710 Carbon fixation by Calvin cycle 4
bra00010 Glycolysis / Gluconeogenesis 3
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra01230 Biosynthesis of amino acids 8
bra00710 Carbon fixation by Calvin cycle 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00562 Inositol phosphate metabolism 6
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00562 Inositol phosphate metabolism 5
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00010 Glycolysis / Gluconeogenesis 6
bna00562 Inositol phosphate metabolism 6
bna00051 Fructose and mannose metabolism 4
bna00710 Carbon fixation by Calvin cycle 4
bna01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 5
cit01230 Biosynthesis of amino acids 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma01230 Biosynthesis of amino acids 3
gma04146 Peroxisome 3
gma00190 Oxidative phosphorylation 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 5
gma01230 Biosynthesis of amino acids 5
gma01240 Biosynthesis of cofactors 3
gma00010 Glycolysis / Gluconeogenesis 3
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 9
gma01230 Biosynthesis of amino acids 3
gma04146 Peroxisome 2
gma00190 Oxidative phosphorylation 2
gma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 4
vvi01240 Biosynthesis of cofactors 3
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 8
ppo00710 Carbon fixation by Calvin cycle 6
ppo01230 Biosynthesis of amino acids 5
ppo00030 Pentose phosphate pathway 3
ppo00630 Glyoxylate and dicarboxylate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo01230 Biosynthesis of amino acids 8
ppo00710 Carbon fixation by Calvin cycle 7
ppo00630 Glyoxylate and dicarboxylate metabolism 5
ppo00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
mtr01230 Biosynthesis of amino acids 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00710 Carbon fixation by Calvin cycle 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 4
sly00710 Carbon fixation by Calvin cycle 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00051 Fructose and mannose metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly01230 Biosynthesis of amino acids 3
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 10
sot01200 Carbon metabolism 5
sot00010 Glycolysis / Gluconeogenesis 4
sot01210 2-Oxocarboxylic acid metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot00010 Glycolysis / Gluconeogenesis 4
sot00710 Carbon fixation by Calvin cycle 4
sot01200 Carbon metabolism 4
sot01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 6
nta01230 Biosynthesis of amino acids 6
nta03010 Ribosome 4
nta00010 Glycolysis / Gluconeogenesis 4
nta00051 Fructose and mannose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 4
nta00051 Fructose and mannose metabolism 4
nta00562 Inositol phosphate metabolism 4
nta00710 Carbon fixation by Calvin cycle 4
nta01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 5
nta01200 Carbon metabolism 5
nta01230 Biosynthesis of amino acids 5
nta00051 Fructose and mannose metabolism 4
nta00562 Inositol phosphate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa00710 Carbon fixation by Calvin cycle 5
osa01230 Biosynthesis of amino acids 5
osa00030 Pentose phosphate pathway 3
osa00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 5
zma01240 Biosynthesis of cofactors 4
zma00710 Carbon fixation by Calvin cycle 4
zma01230 Biosynthesis of amino acids 4
zma00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 5
zma00061 Fatty acid biosynthesis 4
zma01212 Fatty acid metabolism 4
zma00190 Oxidative phosphorylation 4
zma04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 10
tae01200 Carbon metabolism 10
tae01230 Biosynthesis of amino acids 10
tae00030 Pentose phosphate pathway 7
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 8
tae01200 Carbon metabolism 8
tae01230 Biosynthesis of amino acids 8
tae00030 Pentose phosphate pathway 5
tae01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 4
tae01200 Carbon metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 3
hvu01200 Carbon metabolism 3
hvu01230 Biosynthesis of amino acids 3
hvu00010 Glycolysis / Gluconeogenesis 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi01240 Biosynthesis of cofactors 2
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 5
bdi01200 Carbon metabolism 4
bdi01230 Biosynthesis of amino acids 3
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 7
cre00010 Glycolysis / Gluconeogenesis 6
cre01230 Biosynthesis of amino acids 5
cre01210 2-Oxocarboxylic acid metabolism 3
cre00350 Tyrosine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922568 107949084 107916706 816652 103842552 103864252 106420738 125607974 106368808 102617521 100819824 100812398 100799358 100260576 7453631 7494267 25499344 101250846 101246286 102583463 102601486 107806500 107769721 107760622 4347691 100191222 100193000 123122343 123104574 123112845 123400115 8063311 100829343 5715343
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