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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922964   rho-N domain-containing protein 1, chloroplastic 
 ghi-r.1   107927487   rho-N domain-containing protein 1, chloroplastic 
 ghi-r.1   107939957   rho-N domain-containing protein 1, chloroplastic 
 ghi-r.1   107923881   rho-N domain-containing protein 1, chloroplastic 
 ath-u.5   AT2G31150   ATP binding / ATPase 
 ath-u.5   RHON1   Rho termination factor 
 bra-r.6   103857360   rho-N domain-containing protein 1, chloroplastic 
 bna-r.1   106400834   rho-N domain-containing protein 1, chloroplastic-like 
 bna-r.1   106387838   rho-N domain-containing protein 1, chloroplastic 
 bna-r.1   106445710   rho-N domain-containing protein 1, chloroplastic-like 
 cit-r.1   102613568   rho-N domain-containing protein 1, chloroplastic 
 gma-u.5   100795108   rho-N domain-containing protein 1, chloroplastic 
 gma-u.5   100305743   rho domain-containing protein 
 vvi-u.5   100261778   rho-N domain-containing protein 1, chloroplastic 
 ppo-u.5   7471964   rho-N domain-containing protein 1, chloroplastic 
 mtr-u.5   25484254   rho-N domain-containing protein 1, chloroplastic 
 sly-u.5   101260169   termination factor RHON1-like protein 
 sot-r.1   102597228   rho-N domain-containing protein 1, chloroplastic 
 nta-r.1   107779204   rho-N domain-containing protein 1, chloroplastic 
 nta-r.1   107809466   rho-N domain-containing protein 1, chloroplastic-like 
 osa-u.5   4331846   SAP-like protein BP-73 
 zma-u.5   109946067   SAP-like protein BP-73 
 zma-u.5   100281034   uncharacterized LOC100281034 
 tae-r.2   123146053   SAP-like protein BP-73 
 tae-r.2   123139457   SAP-like protein BP-73 
 tae-r.2   123128899   SAP-like protein BP-73 
 hvu-r.1   123402767   SAP-like protein BP-73 
 sbi-r.1   110434971   SAP-like protein BP-73 
 bdi-r.1   100846001   SAP-like protein BP-73 

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Top 50 coexpressed genes to 107922964 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922964 (ghi-r.1 coexpression data)

CoexMap"107922964"


ghiLOC107922964 | Entrez gene ID : 107922964    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 3 1 2 1 1 1 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006353 [list] [network] DNA-templated transcription termination  (30 genes)  IEA  
GO CC
GO MF
Protein XP_016708654.1 [sequence] [blastp]
XP_040962072.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 2  (predict for XP_016708654.1)
nucl 7,  chlo 3  (predict for XP_040962072.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_016708654.1)
chlo 4,  other 3  (predict for XP_040962072.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922964
ghi-r.1
for
107927487
ghi-r.1
for
107939957
ghi-r.1
for
107923881
ath-u.5
for
AT2G31150
ath-u.5
for
RHON1
bra-r.6
for
103857360
bna-r.1
for
106400834
bna-r.1
for
106387838
bna-r.1
for
106445710
cit-r.1
for
102613568
gma-u.5
for
100795108
gma-u.5
for
100305743
vvi-u.5
for
100261778
ppo-u.5
for
7471964
mtr-u.5
for
25484254
sly-u.5
for
101260169
sot-r.1
for
102597228
nta-r.1
for
107779204
nta-r.1
for
107809466
osa-u.5
for
4331846
zma-u.5
for
109946067
zma-u.5
for
100281034
tae-r.2
for
123146053
tae-r.2
for
123139457
tae-r.2
for
123128899
hvu-r.1
for
123402767
sbi-r.1
for
110434971
bdi-r.1
for
100846001


Ortholog ID: 6818
Species ghi ghi ghi ath ath bra bna bna bna cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107922964 LOC107939957 LOC107923881 AT2G31150 RHON1 LOC103857360 LOC106400834 LOC106387838 LOC106437754 LOC102613568 LOC100795108 LOC100305743 LOC100261778 LOC7471964 LOC25484254 LOC101260169 LOC102597228 LOC107779204 LOC107809466 LOC4331846 LOC109946067 LOC100281034 LOC123146053 LOC123139457 LOC123128899 LOC123402767 LOC110434971 LOC100846001
Function* rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic ATP binding / ATPase Rho termination factor rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic-like rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic-like rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic rho domain-containing protein rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic termination factor RHON1-like protein rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic rho-N domain-containing protein 1, chloroplastic-like SAP-like protein BP-73 SAP-like protein BP-73 uncharacterized LOC100281034 SAP-like protein BP-73 SAP-like protein BP-73 SAP-like protein BP-73 SAP-like protein BP-73 SAP-like protein BP-73 SAP-like protein BP-73
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00300 Lysine biosynthesis 4
bna00470 D-Amino acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00240 Pyrimidine metabolism 3
bna00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta00261 Monobactam biosynthesis 2
nta00300 Lysine biosynthesis 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922964 107939957 107923881 817671 837128 103857360 106400834 106387838 106437754 102613568 100795108 100305743 100261778 7471964 25484254 101260169 102597228 107779204 107809466 4331846 109946067 100281034 123146053 123139457 123128899 123402767 110434971 100846001
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