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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107924431   peptidyl-prolyl cis-trans isomerase CYP65 
 ghi-r.1   107945461   peptidyl-prolyl cis-trans isomerase CYP65 
 ath-u.5   PUB49   plant U-box 49 
 bra-r.6   103874045   peptidyl-prolyl cis-trans isomerase CYP65 
 bna-r.1   106443796   peptidyl-prolyl cis-trans isomerase CYP65 
 cit-r.1   102622401   peptidyl-prolyl cis-trans isomerase CYP65 
 gma-u.5   CYP19   peptidyl-prolyl cis-trans isomerase CYP19 
 gma-u.5   CYP18   peptidyl-prolyl cis-trans isomerase CYP18 
 vvi-u.5   100241654   peptidyl-prolyl cis-trans isomerase CYP65 
 ppo-u.5   7489779   peptidyl-prolyl cis-trans isomerase CYP65 
 mtr-u.5   11433994   peptidyl-prolyl cis-trans isomerase CYP65 
 sly-u.5   101261768   peptidyl-prolyl cis-trans isomerase CYP65 
 sot-r.1   102593973   peptidyl-prolyl cis-trans isomerase CYP65 
 nta-r.1   107801136   peptidyl-prolyl cis-trans isomerase CYP65 
 nta-r.1   107793942   peptidyl-prolyl cis-trans isomerase CYP65 
 osa-u.5   4331972   peptidyl-prolyl cis-trans isomerase CYP65 
 zma-u.5   103632256   peptidyl-prolyl cis-trans isomerase CYP65 
 tae-r.2   123093091   peptidyl-prolyl cis-trans isomerase CYP65 
 tae-r.2   123084976   peptidyl-prolyl cis-trans isomerase CYP65 
 tae-r.2   123098370   peptidyl-prolyl cis-trans isomerase CYP65 
 hvu-r.1   123449409   peptidyl-prolyl cis-trans isomerase CYP65 
 sbi-r.1   8054237   peptidyl-prolyl cis-trans isomerase CYP65 
 bdi-r.1   100828731   peptidyl-prolyl cis-trans isomerase CYP65 
 cre-r.1   CHLRE_10g457000v5   uncharacterized protein 

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Top 50 coexpressed genes to 107924431 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107924431 (ghi-r.1 coexpression data)

CoexMap"107924431"


ghiLOC107924431 | Entrez gene ID : 107924431    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (86 genes)  IEA  
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO:0006457 [list] [network] protein folding  (443 genes)  IEA  
GO CC
GO:0071013 [list] [network] catalytic step 2 spliceosome  (137 genes)  IEA  
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (147 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016710370.1 [sequence] [blastp]
XP_016710379.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  mito 1,  pero 1,  cysk 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_016710370.1)
nucl 4,  cyto 2,  pero 1,  cyto_plas 1  (predict for XP_016710379.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016710370.1)
other 8  (predict for XP_016710379.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107924431
ghi-r.1
for
107945461
ath-u.5
for
PUB49
bra-r.6
for
103874045
bna-r.1
for
106443796
cit-r.1
for
102622401
gma-u.5
for
CYP19
gma-u.5
for
CYP18
vvi-u.5
for
100241654
ppo-u.5
for
7489779
mtr-u.5
for
11433994
sly-u.5
for
101261768
sot-r.1
for
102593973
nta-r.1
for
107801136
nta-r.1
for
107793942
osa-u.5
for
4331972
zma-u.5
for
103632256
tae-r.2
for
123093091
tae-r.2
for
123084976
tae-r.2
for
123098370
hvu-r.1
for
123449409
sbi-r.1
for
8054237
bdi-r.1
for
100828731
cre-r.1
for
CHLRE_10g457000v5


Ortholog ID: 11027
Species ghi ghi ath bra bna cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107924431 LOC107945461 PUB49 LOC103874045 LOC106443796 LOC102622401 CYP19 CYP18 LOC100241654 LOC7489779 LOC11433994 LOC101261768 LOC102593973 LOC107801136 LOC107793942 LOC4331972 LOC103632256 LOC123093091 LOC123084976 LOC123098370 LOC123449409 LOC8054237 LOC100828731 CHLRE_10g457000v5
Function* peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 plant U-box 49 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP19 peptidyl-prolyl cis-trans isomerase CYP18 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 peptidyl-prolyl cis-trans isomerase CYP65 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 6
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00350 Tyrosine metabolism 2
gma00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot04120 Ubiquitin mediated proteolysis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03040 Spliceosome 3
tae00620 Pyruvate metabolism 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 3
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00564 Glycerophospholipid metabolism 2
sbi00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924431 107945461 836889 103874045 106443796 102622401 100819923 100785814 100241654 7489779 11433994 101261768 102593973 107801136 107793942 4331972 103632256 123093091 123084976 123098370 123449409 8054237 100828731 5724113
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