ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107925289	uncharacterized LOC107925289
ghi-r.1	107945319	uncharacterized LOC107945319
ghi-r.1	107934692	uncharacterized LOC107934692
ghi-r.1	107916719	uncharacterized LOC107916719
ath-u.5	AT1G29800	RING/FYVE/PHD-type zinc finger family protein
bra-r.6	103840457	uncharacterized LOC103840457
bna-r.1	106367379	uncharacterized LOC106367379
bna-r.1	111206055	uncharacterized LOC111206055
cit-r.1	102625911	uncharacterized LOC102625911
cit-r.1	102622012	hypothetical protein
gma-u.5	100813648	uncharacterized LOC100813648
gma-u.5	100785341	uncharacterized LOC100785341
vvi-u.5	100241291	uncharacterized LOC100241291
vvi-u.5	100246883	uncharacterized LOC100246883
ppo-u.5	7455889	uncharacterized LOC7455889
ppo-u.5	7472334	uncharacterized LOC7472334
ppo-u.5	7476312	uncharacterized LOC7476312
mtr-u.5	25486015	uncharacterized LOC25486015
sly-u.5	101246786	uncharacterized LOC101246786
sot-r.1	102592270	uncharacterized LOC102592270
nta-r.1	107815060	uncharacterized LOC107815060
nta-r.1	107790590	uncharacterized LOC107790590
osa-u.5	4328815	uncharacterized LOC4328815
osa-u.5	4341271	uncharacterized LOC4341271
zma-u.5	100282787	uncharacterized LOC100282787
zma-u.5	100280689	uncharacterized LOC100280689
zma-u.5	100383394	putative FYVE zinc finger containing actin-binding-domain protein family
tae-r.2	123161807	uncharacterized LOC123161807
tae-r.2	123147967	uncharacterized LOC123147967
tae-r.2	123167136	uncharacterized LOC123167136
hvu-r.1	123408650	uncharacterized LOC123408650
sbi-r.1	8085562	uncharacterized LOC8085562
sbi-r.1	8076695	uncharacterized LOC8076695
bdi-r.1	100823549	uncharacterized LOC100823549
bdi-r.1	100827992	uncharacterized LOC100827992

Top 50 coexpressed genes to 107925289 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107925289 (ghi-r.1 coexpression data)

CoexMap"107925289"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:1900027 [list] [network] regulation of ruffle assembly

(10 genes)

IEA

GO CC

GO:0032587 [list] [network] ruffle membrane

(10 genes)

IEA

GO MF

GO:0035091 [list] [network] phosphatidylinositol binding	(189 genes)	IEA
GO:0046872 [list] [network] metal ion binding	(4664 genes)	IEA

Protein

XP_016711427.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 2, vacu 2, chlo 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_016711427.2)

Subcellular
localization
TargetP

other 8

(predict for XP_016711427.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107925289	ghi-r.1 for 107945319	ghi-r.1 for 107934692	ghi-r.1 for 107916719	ath-u.5 for AT1G29800	bra-r.6 for 103840457	bna-r.1 for 106367379	bna-r.1 for 111206055	cit-r.1 for 102625911	cit-r.1 for 102622012	gma-u.5 for 100813648	gma-u.5 for 100785341	vvi-u.5 for 100241291	vvi-u.5 for 100246883	ppo-u.5 for 7455889	ppo-u.5 for 7472334	ppo-u.5 for 7476312	mtr-u.5 for 25486015	sly-u.5 for 101246786	sot-r.1 for 102592270	nta-r.1 for 107815060	nta-r.1 for 107790590	osa-u.5 for 4328815	osa-u.5 for 4341271	zma-u.5 for 100282787	zma-u.5 for 100280689	zma-u.5 for 100383394	tae-r.2 for 123161807	tae-r.2 for 123147967	tae-r.2 for 123167136	hvu-r.1 for 123408650	sbi-r.1 for 8085562	sbi-r.1 for 8076695	bdi-r.1 for 100823549	bdi-r.1 for 100827992

Ortholog

Ortholog ID: 5419

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107925289

uncharacterized LOC107945319

uncharacterized LOC121203541

RING/FYVE/PHD-type zinc finger family protein

uncharacterized LOC103840457

uncharacterized LOC106367379

uncharacterized LOC111206055

uncharacterized LOC102625911

hypothetical protein

uncharacterized LOC100813648

uncharacterized LOC100785341

uncharacterized LOC100241291

uncharacterized LOC100246883

uncharacterized LOC7455889

uncharacterized LOC7472334

uncharacterized LOC7476312

uncharacterized LOC25486015

uncharacterized LOC101246786

uncharacterized LOC102592270

uncharacterized LOC107815060

uncharacterized LOC107790590

uncharacterized LOC4328815

uncharacterized LOC4341271

uncharacterized LOC100282787

uncharacterized LOC100280689

putative FYVE zinc finger containing actin-binding-domain protein family

uncharacterized LOC123161807

uncharacterized LOC123147967

uncharacterized LOC123167136

uncharacterized LOC123408650

uncharacterized LOC8085562

uncharacterized LOC8076695

uncharacterized LOC100823549

uncharacterized LOC100827992

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	5
ghi01212	Fatty acid metabolism	5
ghi00071	Fatty acid degradation	3
ghi00410	beta-Alanine metabolism	3
ghi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi01200	Carbon metabolism	6
ghi01212	Fatty acid metabolism	5
ghi00071	Fatty acid degradation	3
ghi00410	beta-Alanine metabolism	3
ghi00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00564	Glycerophospholipid metabolism	5
bna00592	alpha-Linolenic acid metabolism	5
bna04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04136	Autophagy - other	4
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00564	Glycerophospholipid metabolism	2
gma00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04136	Autophagy - other	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	4
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04136	Autophagy - other	4
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	6
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	5
tae00600	Sphingolipid metabolism	3
tae04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	2
sbi00592	alpha-Linolenic acid metabolism	2
sbi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00071	Fatty acid degradation	3
sbi00592	alpha-Linolenic acid metabolism	3
sbi01212	Fatty acid metabolism	3
sbi00410	beta-Alanine metabolism	2
sbi00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

107925289

107945319

121203541

839858

103840457

106367379

111206055

102625911

102622012

100813648

100785341

100241291

100246883

7455889

7472334

7476312

25486015

101246786

102592270

107815060

107790590

4328815

4341271

100282787

100280689

100383394

123161807

123147967

123167136

123408650

8085562

8076695

100823549

100827992

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	2	2	2	2	3	1	1	1	2	2	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107925289 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107925289 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**