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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107925923   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 ath-u.5   AT2G26800   Aldolase superfamily protein 
 gma-u.5   100777073   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 gma-u.5   100788349   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 gma-u.5   100791169   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 vvi-u.5   100264975   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 vvi-u.5   100243192   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 ppo-u.5   7454876   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 ppo-u.5   7495691   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 mtr-u.5   11413302   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 mtr-u.5   11406357   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 sly-u.5   101259975   uncharacterized LOC101259975 
 sly-u.5   101263871   hydroxymethylglutaryl-CoA lyase, mitochondrial 
 osa-u.5   4351434   uncharacterized LOC4351434 
 osa-u.5   4349718   uncharacterized LOC4349718 
 osa-u.5   4326266   uncharacterized LOC4326266 
 zma-u.5   100283677   uncharacterized LOC100283677 
 zma-u.5   100193689   hydroxymethylglutaryl-CoA lyase 

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Top 50 coexpressed genes to 107925923 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107925923 (ghi-r.1 coexpression data)

CoexMap"107925923"


ghiLOC107925923 | Entrez gene ID : 107925923    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 3 2 2 2 2 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00280 [list] [network] Valine, leucine and isoleucine degradation (115 genes)
ghi00650 [list] [network] Butanoate metabolism (61 genes)
ghi04146 [list] [network] Peroxisome (210 genes)
GO BP
GO:0046951 [list] [network] ketone body biosynthetic process  (4 genes)  IEA  
GO:0006552 [list] [network] L-leucine catabolic process  (8 genes)  IEA  
GO CC
GO MF
GO:0004419 [list] [network] hydroxymethylglutaryl-CoA lyase activity  (4 genes)  IEA  
Protein XP_016712168.2 [sequence] [blastp]
XP_040936124.1 [sequence] [blastp]
XP_040936125.1 [sequence] [blastp]
XP_040936126.1 [sequence] [blastp]
XP_040936127.1 [sequence] [blastp]
XP_040936128.1 [sequence] [blastp]
XP_040936129.1 [sequence] [blastp]
XP_040936130.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_016712168.2)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_040936124.1)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_040936125.1)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_040936126.1)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_040936127.1)
cyto 7,  pero 1,  plas 1,  golg 1,  golg_plas 1  (predict for XP_040936128.1)
cyto 7,  pero 1,  plas 1,  golg 1,  golg_plas 1  (predict for XP_040936129.1)
cyto 7,  pero 1,  plas 1,  golg 1,  golg_plas 1  (predict for XP_040936130.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_016712168.2)
mito 6  (predict for XP_040936124.1)
mito 6  (predict for XP_040936125.1)
mito 6  (predict for XP_040936126.1)
mito 6  (predict for XP_040936127.1)
other 7  (predict for XP_040936128.1)
other 7  (predict for XP_040936129.1)
other 7  (predict for XP_040936130.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107925923

.
ath-u.5
for
AT2G26800

.
gma-u.5
for
100777073

.
gma-u.5
for
100788349

.
gma-u.5
for
100791169

.
vvi-u.5
for
100264975

.
vvi-u.5
for
100243192

.
ppo-u.5
for
7454876

.
ppo-u.5
for
7495691

.
mtr-u.5
for
11413302

.
mtr-u.5
for
11406357

.
sly-u.5
for
101259975

.
sly-u.5
for
101263871

.
osa-u.5
for
4351434

.
osa-u.5
for
4349718

.
osa-u.5
for
4326266

.
zma-u.5
for
100283677

.
zma-u.5
for
100193689

.


Ortholog ID: 3308
Species ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT2G26800 LOC100817457 LOC100777073 LOC101259975 LOC101263871 LOC4349718 LOC4326266 LOC100283677 LOC100193689 LOC103829636 LOC103858342 LOC100264975 LOC100243192 LOC7495691 LOC11406357 LOC11413302 LOC123078147 LOC123120464 LOC123443490 LOC123395526 LOC121223515 LOC107942773 LOC106438413 LOC106388392 CHLRE_12g485550v5 LOC110433415 LOC8069272 LOC102604357 LOC102600078 LOC102609673 LOC102624255 LOC100839293 LOC100822477 LOC107832586 LOC107796243
Function* Aldolase superfamily protein hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial uncharacterized LOC101259975 hydroxymethylglutaryl-CoA lyase, mitochondrial uncharacterized LOC4349718 uncharacterized LOC4326266 uncharacterized LOC100283677 hydroxymethylglutaryl-CoA lyase hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial-like hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase hydroxymethylglutaryl-CoA lyase, mitochondrial-like hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial-like uncharacterized LOC102609673 hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial hydroxymethylglutaryl-CoA lyase, mitochondrial uncharacterized LOC107832586 hydroxymethylglutaryl-CoA lyase, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
ath00350 Tyrosine metabolism 2
ath00360 Phenylalanine metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00650 Butanoate metabolism 2
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 5
sly04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
osa00280 Valine, leucine and isoleucine degradation 2
osa00650 Butanoate metabolism 2
osa04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 8
osa01200 Carbon metabolism 4
osa00640 Propanoate metabolism 4
osa00650 Butanoate metabolism 3
osa00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00280 Valine, leucine and isoleucine degradation 3
zma04146 Peroxisome 2
zma00561 Glycerolipid metabolism 2
zma00350 Tyrosine metabolism 2
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
vvi01230 Biosynthesis of amino acids 3
vvi00860 Porphyrin metabolism 2
vvi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi04145 Phagosome 3
vvi01240 Biosynthesis of cofactors 2
vvi00500 Starch and sucrose metabolism 2
vvi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
mtr00620 Pyruvate metabolism 3
mtr00061 Fatty acid biosynthesis 2
mtr00640 Propanoate metabolism 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 6
mtr00640 Propanoate metabolism 2
mtr00785 Lipoic acid metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 9
tae04146 Peroxisome 6
tae00640 Propanoate metabolism 5
tae00650 Butanoate metabolism 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 5
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00280 Valine, leucine and isoleucine degradation 3
hvu00650 Butanoate metabolism 2
hvu00620 Pyruvate metabolism 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 4
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi00650 Butanoate metabolism 2
ghi04146 Peroxisome 2
ghi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 4
ghi01200 Carbon metabolism 4
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna04146 Peroxisome 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna04146 Peroxisome 4
bna00760 Nicotinate and nicotinamide metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 6
sbi00310 Lysine degradation 4
sbi00071 Fatty acid degradation 4
sbi00330 Arginine and proline metabolism 3
sbi01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00280 Valine, leucine and isoleucine degradation 4
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
sot00310 Lysine degradation 2
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00020 Citrate cycle (TCA cycle) 2
cit00620 Pyruvate metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 7
bdi00640 Propanoate metabolism 3
bdi00785 Lipoic acid metabolism 2
bdi01210 2-Oxocarboxylic acid metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 3
nta00650 Butanoate metabolism 2
nta04146 Peroxisome 2
nta04136 Autophagy - other 2
nta00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 2
nta00650 Butanoate metabolism 2
nta04146 Peroxisome 2
nta00600 Sphingolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817221 100817457 100777073 101259975 101263871 4349718 4326266 100283677 100193689 103829636 103858342 100264975 100243192 7495691 11406357 11413302 123078147 123120464 123443490 123395526 121223515 107942773 106438413 106388392 5728743 110433415 8069272 102604357 102600078 102609673 102624255 100839293 100822477 107832586 107796243
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