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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107926773   probable low-specificity L-threonine aldolase 1 
 ghi-r.1   107893194   probable low-specificity L-threonine aldolase 1 
 ghi-r.1   107962949   probable low-specificity L-threonine aldolase 1 
 ghi-r.1   107936772   probable low-specificity L-threonine aldolase 1 
 ath-u.5   THA2   threonine aldolase 2 
 ath-u.5   THA1   threonine aldolase 1 
 bra-r.6   103843388   probable low-specificity L-threonine aldolase 1 
 bra-r.6   103871606   probable low-specificity L-threonine aldolase 1 
 bra-r.6   103848910   probable low-specificity L-threonine aldolase 2 
 bna-r.1   106345971   probable low-specificity L-threonine aldolase 2 
 bna-r.1   106415092   low-specificity L-threonine aldolase 1 
 bna-r.1   106346316   low-specificity L-threonine aldolase 1 
 cit-r.1   102610938   low-specificity L-threonine aldolase 1-like 
 gma-u.5   100806463   probable low-specificity L-threonine aldolase 1 
 gma-u.5   100800811   probable low-specificity L-threonine aldolase 1 
 gma-u.5   100790890   L-allo-threonine aldolase-like 
 vvi-u.5   100265578   low-specificity L-threonine aldolase 1 
 ppo-u.5   7487180   low-specificity L-threonine aldolase 1 
 mtr-u.5   25499717   probable low-specificity L-threonine aldolase 1 
 mtr-u.5   11405591   probable low-specificity L-threonine aldolase 1 
 sly-u.5   101247807   low-specificity L-threonine aldolase 1 
 sot-r.1   102577840   L-allo-threonine aldolase-related protein 
 nta-r.1   107784859   low-specificity L-threonine aldolase 1 
 nta-r.1   107779228   low-specificity L-threonine aldolase 1 
 nta-r.1   107820397   low-specificity L-threonine aldolase 1-like 
 osa-u.5   4336402   low-specificity L-threonine aldolase 1 
 zma-u.5   100282861   L-allo-threonine aldolase 
 zma-u.5   100274124   putative threonine aldolase family protein 
 zma-u.5   100272842   putative threonine aldolase family protein 
 tae-r.2   123054000   probable low-specificity L-threonine aldolase 1 
 tae-r.2   123089572   probable low-specificity L-threonine aldolase 2 
 tae-r.2   123046120   probable low-specificity L-threonine aldolase 1 
 hvu-r.1   123449904   probable low-specificity L-threonine aldolase 1 
 hvu-r.1   123447432   probable low-specificity L-threonine aldolase 2 
 hvu-r.1   123430695   probable low-specificity L-threonine aldolase 2 
 sbi-r.1   8075931   probable low-specificity L-threonine aldolase 1 
 sbi-r.1   110436673   probable low-specificity L-threonine aldolase 2 
 bdi-r.1   100842610   probable low-specificity L-threonine aldolase 2 
 cre-r.1   CHLRE_10g423550v5   uncharacterized protein 

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Top 50 coexpressed genes to 107926773 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107926773 (ghi-r.1 coexpression data)

CoexMap"107926773"


ghiLOC107926773 | Entrez gene ID : 107926773    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 3 1 1 2 1 1 3 1 3 3 3 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00260 [list] [network] Glycine, serine and threonine metabolism (150 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0006567 [list] [network] L-threonine catabolic process  (10 genes)  IEA  
GO:0006545 [list] [network] glycine biosynthetic process  (35 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0008732 [list] [network] L-allo-threonine aldolase activity  (6 genes)  IEA  
Protein XP_016713190.1 [sequence] [blastp]
XP_040960499.1 [sequence] [blastp]
XP_040960500.1 [sequence] [blastp]
XP_040960501.1 [sequence] [blastp]
XP_040960502.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1  (predict for XP_016713190.1)
chlo 6,  nucl 2,  cyto 1,  cysk_nucl 1  (predict for XP_040960499.1)
chlo 8,  nucl 1,  cyto 1,  cysk 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_040960500.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_040960501.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_040960502.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016713190.1)
scret 8  (predict for XP_040960499.1)
scret 8  (predict for XP_040960500.1)
other 8  (predict for XP_040960501.1)
other 8  (predict for XP_040960502.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107926773
ghi-r.1
for
107893194
ghi-r.1
for
107962949
ghi-r.1
for
107936772
ath-u.5
for
THA2
ath-u.5
for
THA1
bra-r.6
for
103843388
bra-r.6
for
103871606
bra-r.6
for
103848910
bna-r.1
for
106345971
bna-r.1
for
106415092
bna-r.1
for
106346316
cit-r.1
for
102610938
gma-u.5
for
100806463
gma-u.5
for
100800811
gma-u.5
for
100790890
vvi-u.5
for
100265578
ppo-u.5
for
7487180
mtr-u.5
for
25499717
mtr-u.5
for
11405591
sly-u.5
for
101247807
sot-r.1
for
102577840
nta-r.1
for
107784859
nta-r.1
for
107779228
nta-r.1
for
107820397
osa-u.5
for
4336402
zma-u.5
for
100282861
zma-u.5
for
100274124
zma-u.5
for
100272842
tae-r.2
for
123054000
tae-r.2
for
123089572
tae-r.2
for
123046120
hvu-r.1
for
123449904
hvu-r.1
for
123447432
hvu-r.1
for
123430695
sbi-r.1
for
8075931
sbi-r.1
for
110436673
bdi-r.1
for
100842610
cre-r.1
for
CHLRE_10g423550v5


Ortholog ID: 2548
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma vvi ppo mtr mtr sly sot nta nta nta osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi cre
Symbol LOC107962949 LOC107936772 LOC121223477 THA2 THA1 LOC103843388 LOC103871606 LOC103848910 LOC106377026 LOC125575202 LOC106383126 LOC102610938 LOC100806463 LOC100800811 LOC100790890 LOC100265578 LOC7487180 LOC25499717 LOC11405591 LOC101247807 LOC102577840 LOC107784859 LOC107779228 LOC107820397 LOC4336402 LOC100282861 LOC100274124 LOC100272842 LOC123049791 LOC123093808 LOC123041826 LOC123449904 LOC123447432 LOC123430695 LOC8075931 LOC110436673 LOC100842610 CHLRE_10g423550v5
Function* probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 threonine aldolase 2 threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 low-specificity L-threonine aldolase 1-like low-specificity L-threonine aldolase 1-like probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 L-allo-threonine aldolase-like low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 L-allo-threonine aldolase-related protein low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1 low-specificity L-threonine aldolase 1-like low-specificity L-threonine aldolase 1 L-allo-threonine aldolase putative threonine aldolase family protein putative threonine aldolase family protein probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 probable low-specificity L-threonine aldolase 2 probable low-specificity L-threonine aldolase 1 probable low-specificity L-threonine aldolase 2 probable low-specificity L-threonine aldolase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00941 Flavonoid biosynthesis 2
ghi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00350 Tyrosine metabolism 2
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 7
ath00250 Alanine, aspartate and glutamate metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath01230 Biosynthesis of amino acids 3
ath00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00350 Tyrosine metabolism 4
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00360 Phenylalanine metabolism 3
bra04146 Peroxisome 2
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00010 Glycolysis / Gluconeogenesis 3
bra00020 Citrate cycle (TCA cycle) 3
bra00620 Pyruvate metabolism 3
bra00785 Lipoic acid metabolism 3
bra01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna01230 Biosynthesis of amino acids 7
bna00270 Cysteine and methionine metabolism 2
bna00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00260 Glycine, serine and threonine metabolism 7
bna01230 Biosynthesis of amino acids 7
bna00270 Cysteine and methionine metabolism 2
bna00450 Selenocompound metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 6
gma04016 MAPK signaling pathway - plant 2
gma04626 Plant-pathogen interaction 2
gma00941 Flavonoid biosynthesis 2
gma00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma03460 Fanconi anemia pathway 2
gma00260 Glycine, serine and threonine metabolism 2
gma01230 Biosynthesis of amino acids 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 6
gma00230 Purine metabolism 5
gma00250 Alanine, aspartate and glutamate metabolism 4
gma00640 Propanoate metabolism 2
gma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 6
vvi01230 Biosynthesis of amino acids 4
vvi01200 Carbon metabolism 3
vvi00020 Citrate cycle (TCA cycle) 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo00480 Glutathione metabolism 2
ppo00071 Fatty acid degradation 2
ppo01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr00260 Glycine, serine and threonine metabolism 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 7
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr00640 Propanoate metabolism 3
mtr00785 Lipoic acid metabolism 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 5
sly00071 Fatty acid degradation 4
sly00310 Lysine degradation 3
sly01212 Fatty acid metabolism 3
sly00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 3
sot00270 Cysteine and methionine metabolism 3
sot00280 Valine, leucine and isoleucine degradation 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta01250 Biosynthesis of nucleotide sugars 3
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta01250 Biosynthesis of nucleotide sugars 4
nta00260 Glycine, serine and threonine metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 8
nta00052 Galactose metabolism 4
nta00260 Glycine, serine and threonine metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 3
zma04144 Endocytosis 2
zma04517 IgSF CAM signaling 2
zma05100 Bacterial invasion of epithelial cells 2
zma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00260 Glycine, serine and threonine metabolism 5
zma01230 Biosynthesis of amino acids 4
zma01210 2-Oxocarboxylic acid metabolism 4
zma01200 Carbon metabolism 4
zma00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 6
tae01230 Biosynthesis of amino acids 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 4
tae01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 8
tae00260 Glycine, serine and threonine metabolism 6
tae00280 Valine, leucine and isoleucine degradation 6
tae01210 2-Oxocarboxylic acid metabolism 6
tae00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00280 Valine, leucine and isoleucine degradation 3
sbi01210 2-Oxocarboxylic acid metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi00640 Propanoate metabolism 2
sbi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 4
sbi00260 Glycine, serine and threonine metabolism 3
sbi01240 Biosynthesis of cofactors 2
sbi00270 Cysteine and methionine metabolism 2
sbi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
bdi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962949 107936772 121223477 819608 837385 103843388 103871606 103848910 106377026 125575202 106383126 102610938 100806463 100800811 100790890 100265578 7487180 25499717 11405591 101247807 102577840 107784859 107779228 107820397 4336402 100282861 100274124 100272842 123049791 123093808 123041826 123449904 123447432 123430695 8075931 110436673 100842610 5728226
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