Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927572   uncharacterized LOC107927572 
 ghi-r.1   121215885   uncharacterized LOC121215885 
 ghi-r.1   121216240   putative vacuolar protein sorting-associated protein 13A 
 ghi-r.1   121215884   uncharacterized LOC121215884 
 ath-u.5   AT5G24740   vacuolar protein sorting-associated protein, putative (DUF1162) 
 bra-r.6   103874343   uncharacterized LOC103874343 
 bna-r.1   106348493   uncharacterized LOC106348493 
 bna-r.1   106447428   uncharacterized LOC106447428 
 cit-r.1   102613344   uncharacterized LOC102613344 
 gma-u.5   100783352   uncharacterized LOC100783352 
 vvi-u.5   100245550   uncharacterized LOC100245550 
 ppo-u.5   18096003   uncharacterized LOC18096003 
 mtr-u.5   11424203   uncharacterized LOC11424203 
 sly-u.5   101246789   intermembrane lipid transfer protein VPS13 
 sot-r.1   102596584   uncharacterized LOC102596584 
 sot-r.1   102596923   vacuolar protein sorting-associated protein 13A-like 
 nta-r.1   107821075   uncharacterized LOC107821075 
 nta-r.1   107809406   uncharacterized LOC107809406 
 nta-r.1   107781582   intermembrane lipid transfer protein VPS13 
 osa-u.5   4344518   intermembrane lipid transfer protein VPS13 
 zma-u.5   100384121   uncharacterized LOC100384121 
 tae-r.2   123166530   uncharacterized LOC123166530 
 tae-r.2   123156515   uncharacterized LOC123156515 
 hvu-r.1   123408636   uncharacterized LOC123408636 
 sbi-r.1   8066100   uncharacterized LOC8066100 
 bdi-r.1   100822443   putative vacuolar protein sorting-associated protein 13A 
 cre-r.1   CHLRE_17g727600v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107927572 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107927572 (ghi-r.1 coexpression data)

CoexMap"107927572"


ghiLOC107927572 | Entrez gene ID : 107927572    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 1 1 1 1 1 2 3 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045053 [list] [network] protein retention in Golgi apparatus  (12 genes)  IEA  
GO:0006623 [list] [network] protein targeting to vacuole  (42 genes)  IEA  
GO CC
GO:0019898 [list] [network] extrinsic component of membrane  (68 genes)  IEA  
GO MF
Protein XP_016714153.2 [sequence] [blastp]
XP_016714155.2 [sequence] [blastp]
XP_040970396.1 [sequence] [blastp]
XP_040970397.1 [sequence] [blastp]
XP_040970399.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cysk_nucl 2,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_016714153.2)
chlo 4,  nucl 3,  cysk_nucl 2,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_016714155.2)
chlo 5,  nucl 2,  cysk_nucl 1,  cyto 1,  mito 1,  vacu 1  (predict for XP_040970396.1)
nucl 2,  chlo 2,  cysk_nucl 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1  (predict for XP_040970397.1)
chlo 4,  nucl 3,  cysk_nucl 2,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for XP_040970399.1)
Subcellular
localization
TargetP
mito 6,  other 5  (predict for XP_016714153.2)
mito 6,  other 5  (predict for XP_016714155.2)
other 4,  mito 3  (predict for XP_040970396.1)
other 9  (predict for XP_040970397.1)
mito 6,  other 5  (predict for XP_040970399.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927572
ghi-r.1
for
121215885
ghi-r.1
for
121216240
ghi-r.1
for
121215884
ath-u.5
for
AT5G24740
bra-r.6
for
103874343
bna-r.1
for
106348493
bna-r.1
for
106447428
cit-r.1
for
102613344
gma-u.5
for
100783352
vvi-u.5
for
100245550
ppo-u.5
for
18096003
mtr-u.5
for
11424203
sly-u.5
for
101246789
sot-r.1
for
102596584
sot-r.1
for
102596923
nta-r.1
for
107821075
nta-r.1
for
107809406
nta-r.1
for
107781582
osa-u.5
for
4344518
zma-u.5
for
100384121
tae-r.2
for
123166530
tae-r.2
for
123156515
hvu-r.1
for
123408636
sbi-r.1
for
8066100
bdi-r.1
for
100822443
cre-r.1
for
CHLRE_17g727600v5


Ortholog ID: 8623
Species ghi ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot sot nta nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107927572 LOC121215885 LOC121215884 AT5G24740 LOC103874343 LOC106348493 LOC106447428 LOC102613344 LOC100783352 LOC100245550 LOC18096003 LOC11424203 LOC101246789 LOC102596584 LOC102596923 LOC107821075 LOC107809406 LOC142176002 LOC4344518 LOC100384121 LOC123166530 LOC123156515 LOC123408636 LOC8066100 LOC100822443 CHLRE_17g727600v5
Function* uncharacterized LOC107927572 uncharacterized LOC121215885 uncharacterized LOC121215884 vacuolar protein sorting-associated protein, putative (DUF1162) uncharacterized LOC103874343 uncharacterized LOC106348493 uncharacterized LOC106447428 uncharacterized LOC102613344 uncharacterized LOC100783352 uncharacterized LOC100245550 uncharacterized LOC18096003 uncharacterized LOC11424203 intermembrane lipid transfer protein VPS13 uncharacterized LOC102596584 vacuolar protein sorting-associated protein 13A-like uncharacterized LOC107821075 uncharacterized LOC107809406 intermembrane lipid transfer protein VPS13-like intermembrane lipid transfer protein VPS13 uncharacterized LOC100384121 uncharacterized LOC123166530 uncharacterized LOC123156515 uncharacterized LOC123408636 uncharacterized LOC8066100 putative vacuolar protein sorting-associated protein 13A uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03018 RNA degradation 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 4
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 4
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927572 121215885 121215884 832543 103874343 106348493 106447428 102613344 100783352 100245550 18096003 11424203 101246789 102596584 102596923 107821075 107809406 142176002 4344518 100384121 123166530 123156515 123408636 8066100 100822443 5722810
The preparation time of this page was 0.1 [sec].