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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927580   glutamate--tRNA ligase, cytoplasmic 
 ghi-r.1   121229686   glutamate--tRNA ligase, cytoplasmic 
 ghi-r.1   107915745   glutamate--tRNA ligase, cytoplasmic 
 ath-u.5   AT5G26710   Glutamyl/glutaminyl-tRNA synthetase, class Ic 
 bra-r.6   103854720   glutamate--tRNA ligase, cytoplasmic 
 bra-r.6   103837134   glutamate--tRNA ligase, cytoplasmic 
 bna-r.1   106382542   glutamate--tRNA ligase, cytoplasmic-like 
 bna-r.1   111198215   glutamate--tRNA ligase, cytoplasmic 
 bna-r.1   106440352   glutamate--tRNA ligase, cytoplasmic 
 cit-r.1   102616460   glutamate--tRNA ligase, cytoplasmic 
 gma-u.5   100791298   glutamate--tRNA ligase, cytoplasmic 
 gma-u.5   100809656   glutamate--tRNA ligase, cytoplasmic 
 vvi-u.5   100263087   glutamate--tRNA ligase, cytoplasmic 
 ppo-u.5   18098472   glutamate--tRNA ligase, cytoplasmic 
 ppo-u.5   7464757   glutamate--tRNA ligase, cytoplasmic 
 mtr-u.5   11407510   glutamate--tRNA ligase, cytoplasmic 
 sly-u.5   101244420   glutamate--tRNA ligase, cytoplasmic 
 sot-r.1   102601645   glutamate--tRNA ligase, cytoplasmic 
 nta-r.1   107829795   glutamate--tRNA ligase, cytoplasmic 
 nta-r.1   107770544   glutamate--tRNA ligase, cytoplasmic-like 
 osa-u.5   4325167   glutamate--tRNA ligase, cytoplasmic 
 osa-u.5   4348464   glutamate--tRNA ligase, cytoplasmic 
 zma-u.5   100383320   Glutamate--tRNA ligase cytoplasmic 
 zma-u.5   100281059   glutamyl-tRNA synthetase, cytoplasmic 
 tae-r.2   123061078   glutamate--tRNA ligase, cytoplasmic 
 tae-r.2   123065933   glutamate--tRNA ligase, cytoplasmic 
 tae-r.2   123069667   glutamate--tRNA ligase, cytoplasmic 
 hvu-r.1   123443500   glutamate--tRNA ligase, cytoplasmic-like 
 hvu-r.1   123447772   glutamate--tRNA ligase, cytoplasmic-like 
 sbi-r.1   8085509   glutamate--tRNA ligase, cytoplasmic 
 sbi-r.1   8070494   glutamate--tRNA ligase, cytoplasmic 
 bdi-r.1   100827571   glutamate--tRNA ligase, cytoplasmic 
 cre-r.1   CHLRE_11g467547v5   uncharacterized protein 

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Top 50 coexpressed genes to 107927580 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107927580 (ghi-r.1 coexpression data)

CoexMap"107927580"


ghiLOC107927580 | Entrez gene ID : 107927580    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 3 1 2 1 2 1 1 1 2 2 2 3 2 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00860 [list] [network] Porphyrin metabolism (118 genes)
ghi00970 [list] [network] Aminoacyl-tRNA biosynthesis (172 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0006424 [list] [network] glutamyl-tRNA aminoacylation  (5 genes)  IEA  
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0017102 [list] [network] methionyl glutamyl tRNA synthetase complex  (3 genes)  IEA  
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0004818 [list] [network] glutamate-tRNA ligase activity  (5 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_040947624.1 [sequence] [blastp]
XP_040947625.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  mito 1,  plas 1,  pero 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_040947624.1)
cyto 6,  nucl 1,  mito 1,  plas 1,  pero 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_040947625.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040947624.1)
other 6  (predict for XP_040947625.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927580
ghi-r.1
for
121229686
ghi-r.1
for
107915745
ath-u.5
for
AT5G26710
bra-r.6
for
103854720
bra-r.6
for
103837134
bna-r.1
for
106382542
bna-r.1
for
111198215
bna-r.1
for
106440352
cit-r.1
for
102616460
gma-u.5
for
100791298
gma-u.5
for
100809656
vvi-u.5
for
100263087
ppo-u.5
for
18098472
ppo-u.5
for
7464757
mtr-u.5
for
11407510
sly-u.5
for
101244420
sot-r.1
for
102601645
nta-r.1
for
107829795
nta-r.1
for
107770544
osa-u.5
for
4325167
osa-u.5
for
4348464
zma-u.5
for
100383320
zma-u.5
for
100281059
tae-r.2
for
123061078
tae-r.2
for
123065933
tae-r.2
for
123069667
hvu-r.1
for
123443500
hvu-r.1
for
123447772
sbi-r.1
for
8085509
sbi-r.1
for
8070494
bdi-r.1
for
100827571
cre-r.1
for
CHLRE_11g467547v5


Ortholog ID: 5178
Species ghi ghi ghi ath bra bra bna bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi cre
Symbol LOC107927580 LOC121229686 LOC107915745 AT5G26710 LOC103854720 LOC103837134 LOC111198215 LOC106444913 LOC106382661 LOC102616460 LOC100791298 LOC100809656 LOC100263087 LOC18098472 LOC7464757 LOC11407510 LOC101244420 LOC102601645 LOC107829795 LOC107770544 LOC4325167 LOC4348464 LOC100383320 LOC100281059 LOC123065933 LOC123078153 LOC123182885 LOC123443500 LOC123447772 LOC8085509 LOC8070494 LOC100827571 CHLRE_11g467547v5
Function* glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic Glutamyl/glutaminyl-tRNA synthetase, class Ic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic-like glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic-like glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic Glutamate--tRNA ligase cytoplasmic glutamyl-tRNA synthetase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic-like glutamate--tRNA ligase, cytoplasmic-like glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic glutamate--tRNA ligase, cytoplasmic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 7
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 6
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 7
bra00970 Aminoacyl-tRNA biosynthesis 2
bra00620 Pyruvate metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 7
bra01230 Biosynthesis of amino acids 3
bra03010 Ribosome 3
bra03018 RNA degradation 3
bra00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00970 Aminoacyl-tRNA biosynthesis 7
bna01240 Biosynthesis of cofactors 7
bna00100 Steroid biosynthesis 3
bna00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00970 Aminoacyl-tRNA biosynthesis 7
bna01240 Biosynthesis of cofactors 7
bna00010 Glycolysis / Gluconeogenesis 3
bna00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 7
bna00970 Aminoacyl-tRNA biosynthesis 7
bna01240 Biosynthesis of cofactors 7
bna00010 Glycolysis / Gluconeogenesis 4
bna00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 4
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00051 Fructose and mannose metabolism 2
cit00710 Carbon fixation by Calvin cycle 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 8
gma01200 Carbon metabolism 8
gma01230 Biosynthesis of amino acids 7
gma00970 Aminoacyl-tRNA biosynthesis 4
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma01200 Carbon metabolism 5
gma00010 Glycolysis / Gluconeogenesis 3
gma01230 Biosynthesis of amino acids 3
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 2
vvi03050 Proteasome 2
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00250 Alanine, aspartate and glutamate metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00010 Glycolysis / Gluconeogenesis 3
sly00220 Arginine biosynthesis 2
sly00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00020 Citrate cycle (TCA cycle) 3
sot00785 Lipoic acid metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 8
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 3
osa00513 Various types of N-glycan biosynthesis 3
osa04141 Protein processing in endoplasmic reticulum 3
osa03420 Nucleotide excision repair 2
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 6
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma03018 RNA degradation 3
zma03015 mRNA surveillance pathway 2
zma04382 Cornified envelope formation 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 5
tae00970 Aminoacyl-tRNA biosynthesis 5
tae01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 5
tae00970 Aminoacyl-tRNA biosynthesis 5
tae01240 Biosynthesis of cofactors 5
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 5
tae00970 Aminoacyl-tRNA biosynthesis 5
tae01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi01240 Biosynthesis of cofactors 3
sbi00860 Porphyrin metabolism 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 3
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927580 121229686 107915745 832718 103854720 103837134 111198215 106444913 106382661 102616460 100791298 100809656 100263087 18098472 7464757 11407510 101244420 102601645 107829795 107770544 4325167 4348464 100383320 100281059 123065933 123078153 123182885 123443500 123447772 8085509 8070494 100827571 5726932
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