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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107927956   signal recognition particle 43 kDa protein, chloroplastic 
 ath-u.5   CAO   chloroplast signal recognition particle component (CAO) 
 gma-u.5   100818382   signal recognition particle 43 kDa protein, chloroplastic 
 vvi-u.5   100243569   signal recognition particle 43 kDa protein, chloroplastic 
 ppo-u.5   7472092   signal recognition particle 43 kDa protein, chloroplastic 
 mtr-u.5   25492861   signal recognition particle 43 kDa protein, chloroplastic 
 sly-u.5   101263960   signal recognition particle 43 kDa protein, chloroplastic 
 osa-u.5   4331514   probable signal recognition particle 43 kDa protein, chloroplastic 
 zma-u.5   100382705   Probable signal recognition particle 43 kDa protein, chloroplastic-like 

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Top 50 coexpressed genes to 107927956 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107927956 (ghi-r.1 coexpression data)

CoexMap"107927956"


ghiLOC107927956 | Entrez gene ID : 107927956    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (50 genes)  IEA  
GO:0006325 [list] [network] chromatin organization  (394 genes)  IEA  
GO CC
GO:0005721 [list] [network] pericentric heterochromatin  (1 genes)  IEA  
GO MF
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
Protein XP_016714583.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 4  (predict for XP_016714583.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_016714583.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107927956
ath-u.5
for
CAO
gma-u.5
for
100818382
vvi-u.5
for
100243569
ppo-u.5
for
7472092
mtr-u.5
for
25492861
sly-u.5
for
101263960
osa-u.5
for
4331514
zma-u.5
for
100382705


Ortholog ID: 8920
Species ghi ghi ath bra bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi cre cre
Symbol LOC107908634 LOC107927956 CAO LOC103833041 LOC125591657 LOC102607185 LOC100818382 LOC100243569 LOC7472092 LOC25492861 LOC101263960 LOC102601192 LOC107761768 LOC107768293 LOC4331514 LOC100382705 LOC123098881 LOC123105814 LOC123447310 LOC8057424 CHLRE_17g702250v5 CHLRE_04g231026v5
Function* signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic chloroplast signal recognition particle component (CAO) signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic-like signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic signal recognition particle 43 kDa protein, chloroplastic-like probable signal recognition particle 43 kDa protein, chloroplastic Probable signal recognition particle 43 kDa protein, chloroplastic-like probable signal recognition particle 43 kDa protein, chloroplastic probable signal recognition particle 43 kDa protein, chloroplastic probable signal recognition particle 43 kDa protein, chloroplastic probable signal recognition particle 43 kDa protein, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 6
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 4
bra00710 Carbon fixation by Calvin cycle 3
bra01200 Carbon metabolism 3
bra00195 Photosynthesis 2
bra00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma00900 Terpenoid backbone biosynthesis 2
gma04626 Plant-pathogen interaction 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 6
vvi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 3
ppo00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 3
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 3
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03060 Protein export 3
cre00860 Porphyrin metabolism 3
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107908634 107927956 819358 103833041 125591657 102607185 100818382 100243569 7472092 25492861 101263960 102601192 107761768 107768293 4331514 100382705 123098881 123105814 123447310 8057424 5717284 5729233
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