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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107928737   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 
 ath-u.5   emb2458   FtsH extracellular protease family 
 gma-u.5   100794385   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 
 gma-u.5   100817872   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 
 vvi-u.5   100248755   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 
 ppo-u.5   7487715   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 
 mtr-u.5   11410021   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 
 sly-u.5   101259095   probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic 

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Top 50 coexpressed genes to 107928737 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107928737 (ghi-r.1 coexpression data)

CoexMap"107928737"


ghiLOC107928737 | Entrez gene ID : 107928737    
Species ghi ath gma vvi ppo mtr sly sot hvu tae cit sbi zma cre bna nta bdi bra osa
Paralog 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042981 [list] [network] regulation of apoptotic process  (6 genes)  IEA  
GO:0006508 [list] [network] proteolysis  (1903 genes)  IEA  
GO CC
GO:0009534 [list] [network] chloroplast thylakoid  (354 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (96 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (137 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016715481.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 4,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_016715481.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016715481.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107928737

.
ath-u.5
for
emb2458

.
gma-u.5
for
100794385

.
gma-u.5
for
100817872

.
vvi-u.5
for
100248755

.
ppo-u.5
for
7487715

.
mtr-u.5
for
11410021

.
sly-u.5
for
101259095

.


Ortholog ID: 13160
Species ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol emb2458 LOC100794385 LOC100817872 LOC101259095 LOC103848924 LOC100248755 LOC7487715 LOC11410021 LOC107928737 LOC107951840 LOC106429746 LOC106345959 LOC102605424 LOC102609218 LOC107829614 LOC107814019
Function* FtsH extracellular protease family probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic probable inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic putative inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic putative inactive ATP-dependent zinc metalloprotease FTSHI 5, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00620 Pyruvate metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
gma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra03018 RNA degradation 2
bra00300 Lysine biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819589 100794385 100817872 101259095 103848924 100248755 7487715 11410021 107928737 107951840 106429746 106345959 102605424 102609218 107829614 107814019
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