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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929662   eukaryotic translation initiation factor 4G 
 ghi-r.1   107926254   eukaryotic translation initiation factor 4G 
 ghi-r.1   121224098   eukaryotic translation initiation factor 4G 
 ghi-r.1   107945584   eukaryotic translation initiation factor 4G 
 ath-u.5   EIF4G   eukaryotic translation initiation factor 4G 
 bra-r.6   103862900   eukaryotic translation initiation factor 4G 
 bna-r.1   106375300   eukaryotic translation initiation factor 4G 
 bna-r.1   106445108   eukaryotic translation initiation factor 4G 
 cit-r.1   127901088   uncharacterized LOC127901088 
 cit-r.1   102618073   eukaryotic translation initiation factor 4G 
 gma-u.5   100798562   eukaryotic translation initiation factor 4G 
 gma-u.5   100819084   eukaryotic translation initiation factor 4G 
 gma-u.5   100796636   eukaryotic translation initiation factor 4G 
 vvi-u.5   100261523   eukaryotic translation initiation factor 4G 
 ppo-u.5   7483809   eukaryotic translation initiation factor 4G 
 ppo-u.5   18105106   eukaryotic translation initiation factor 4G 
 mtr-u.5   11419878   eukaryotic translation initiation factor 4G 
 mtr-u.5   25499926   eukaryotic translation initiation factor 4G 
 mtr-u.5   25500065   uncharacterized LOC25500065 
 sly-u.5   101256616   eukaryotic translation initiation factor 4G-like 
 sly-u.5   101248714   eukaryotic translation initiation factor 4G 
 sot-r.1   102589798   eukaryotic translation initiation factor 4G 
 nta-r.1   107832342   eukaryotic translation initiation factor 4G 
 nta-r.1   107821751   eukaryotic translation initiation factor 4G 
 nta-r.1   107779583   eukaryotic translation initiation factor 4G-like 
 osa-u.5   4343565   eukaryotic translation initiation factor 4G-like 
 zma-u.5   103633283   eukaryotic translation initiation factor 4G 
 zma-u.5   103627447   eukaryotic translation initiation factor 4G 
 zma-u.5   103641899   eukaryotic translation initiation factor 4G 
 tae-r.2   123044568   eukaryotic translation initiation factor 4G 
 tae-r.2   123052431   eukaryotic translation initiation factor 4G-like 
 tae-r.2   123046190   eukaryotic translation initiation factor 4G-like 
 hvu-r.1   123425732   eukaryotic translation initiation factor 4G 
 sbi-r.1   8081737   eukaryotic translation initiation factor 4G 
 bdi-r.1   100842805   eukaryotic translation initiation factor 4G 
 bdi-r.1   100840186   eukaryotic translation initiation factor 4G 
 cre-r.1   CHLRE_17g696250v5   uncharacterized protein 

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Top 50 coexpressed genes to 107929662 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929662 (ghi-r.1 coexpression data)

CoexMap"107929662"


ghiLOC107929662 | Entrez gene ID : 107929662    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 2 3 1 2 3 2 1 3 1 3 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0016281 [list] [network] eukaryotic translation initiation factor 4F complex  (26 genes)  IEA  
GO MF
GO:0003743 [list] [network] translation initiation factor activity  (198 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040930288.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_040930288.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_040930288.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929662
ghi-r.1
for
107926254
ghi-r.1
for
121224098
ghi-r.1
for
107945584
ath-u.5
for
EIF4G
bra-r.6
for
103862900
bna-r.1
for
106375300
bna-r.1
for
106445108
cit-r.1
for
127901088
cit-r.1
for
102618073
gma-u.5
for
100798562
gma-u.5
for
100819084
gma-u.5
for
100796636
vvi-u.5
for
100261523
ppo-u.5
for
7483809
ppo-u.5
for
18105106
mtr-u.5
for
11419878
mtr-u.5
for
25499926
mtr-u.5
for
25500065
sly-u.5
for
101256616
sly-u.5
for
101248714
sot-r.1
for
102589798
nta-r.1
for
107832342
nta-r.1
for
107821751
nta-r.1
for
107779583
osa-u.5
for
4343565
zma-u.5
for
103633283
zma-u.5
for
103627447
zma-u.5
for
103641899
tae-r.2
for
123044568
tae-r.2
for
123052431
tae-r.2
for
123046190
hvu-r.1
for
123425732
sbi-r.1
for
8081737
bdi-r.1
for
100842805
bdi-r.1
for
100840186
cre-r.1
for
CHLRE_17g696250v5


Ortholog ID: 3473
Species ghi ghi ghi ath bra bna bna cit cit gma gma gma vvi ppo ppo mtr mtr mtr sly sly sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107929662 LOC107945584 LOC107945583 EIF4G LOC103862900 LOC106375300 LOC106445108 LOC127901088 LOC102618073 LOC100798562 LOC100819084 LOC100790680 LOC100261523 LOC7483809 LOC18105106 LOC11419878 LOC25499926 LOC25500065 LOC101256616 LOC101248714 LOC102589798 LOC107832342 LOC107821751 LOC107809718 LOC4343565 LOC103633283 LOC103641899 LOC103647746 LOC123052431 LOC123046190 LOC123188312 LOC123425732 LOC8081737 LOC100842805 LOC100840186 CHLRE_17g696250v5
Function* eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G uncharacterized LOC127901088 eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G uncharacterized LOC25500065 eukaryotic translation initiation factor 4G-like eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G-like eukaryotic translation initiation factor 4G-like eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G-like eukaryotic translation initiation factor 4G-like eukaryotic translation initiation factor 4G-like eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G eukaryotic translation initiation factor 4G uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03018 RNA degradation 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 3
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
bna03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 5
cit03040 Spliceosome 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
ppo03040 Spliceosome 3
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
sly01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
nta00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 3
sbi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi04120 Ubiquitin mediated proteolysis 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107929662 107945584 107945583 825194 103862900 106375300 106445108 127901088 102618073 100798562 100819084 100790680 100261523 7483809 18105106 11419878 25499926 25500065 101256616 101248714 102589798 107832342 107821751 107809718 4343565 103633283 103641899 103647746 123052431 123046190 123188312 123425732 8081737 100842805 100840186 5717392
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