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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107929816   uncharacterized LOC107929816 
 ghi-r.1   107902039   uncharacterized LOC107902039 
 ath-u.5   AT1G16800   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103842833   helicase SEN1 
 bna-r.1   106415536   helicase SEN1 
 bna-r.1   106415406   helicase SEN1 
 cit-r.1   102613021   helicase SEN1 
 gma-u.5   102663671   uncharacterized LOC102663671 
 vvi-u.5   100265030   uncharacterized LOC100265030 
 ppo-u.5   7455514   helicase SEN1 
 mtr-u.5   25488022   uncharacterized ATP-dependent helicase C29A10.10c 
 sly-u.5   101249343   uncharacterized LOC101249343 
 sot-r.1   102601107   uncharacterized LOC102601107 
 nta-r.1   107766927   uncharacterized LOC107766927 
 nta-r.1   107793267   uncharacterized LOC107793267 
 osa-u.5   107278869   uncharacterized ATP-dependent helicase C29A10.10c 
 zma-u.5   103632948   helicase SEN1 
 tae-r.2   123121993   uncharacterized LOC123121993 
 tae-r.2   123112482   uncharacterized LOC123112482 
 hvu-r.1   123399545   uncharacterized LOC123399545 
 sbi-r.1   8055887   uncharacterized LOC8055887 
 bdi-r.1   100835663   uncharacterized LOC100835663 

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Top 50 coexpressed genes to 107929816 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107929816 (ghi-r.1 coexpression data)

CoexMap"107929816"


ghiLOC107929816 | Entrez gene ID : 107929816    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004386 [list] [network] helicase activity  (292 genes)  IEA  
Protein XP_016716817.1 [sequence] [blastp]
XP_016716818.1 [sequence] [blastp]
XP_016716819.1 [sequence] [blastp]
XP_040971814.1 [sequence] [blastp]
XP_040971815.1 [sequence] [blastp]
XP_040971816.1 [sequence] [blastp]
XP_040971817.1 [sequence] [blastp]
XP_040971818.1 [sequence] [blastp]
XP_040971819.1 [sequence] [blastp]
XP_040971820.1 [sequence] [blastp]
XP_040971821.1 [sequence] [blastp]
XP_040971822.1 [sequence] [blastp]
XP_040971823.1 [sequence] [blastp]
XP_040971824.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_016716817.1)
nucl 6,  cyto 2,  mito 1,  cysk 1  (predict for XP_016716818.1)
nucl 6,  cyto 3,  nucl_plas 3  (predict for XP_016716819.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_040971814.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_040971815.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_040971816.1)
nucl 6,  cyto 2,  mito 1,  cysk 1  (predict for XP_040971817.1)
chlo 6,  nucl 1,  cysk_nucl 1,  mito 1,  vacu 1  (predict for XP_040971818.1)
chlo 4,  nucl 3,  cysk_nucl 2,  cyto 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for XP_040971819.1)
nucl 6,  cyto 1,  chlo 1,  plas 1,  vacu 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040971820.1)
nucl 6,  cyto 1,  chlo 1,  plas 1,  vacu 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_040971821.1)
nucl 6,  cyto 1,  golg 1,  chlo 1,  vacu 1,  golg_plas 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040971822.1)
nucl 6,  cyto 3,  nucl_plas 3  (predict for XP_040971823.1)
nucl 6,  cyto 2,  mito 1,  cysk 1  (predict for XP_040971824.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016716817.1)
other 8  (predict for XP_016716818.1)
other 8  (predict for XP_016716819.1)
other 8  (predict for XP_040971814.1)
other 8  (predict for XP_040971815.1)
other 8  (predict for XP_040971816.1)
other 8  (predict for XP_040971817.1)
mito 4  (predict for XP_040971818.1)
other 6  (predict for XP_040971819.1)
other 8  (predict for XP_040971820.1)
other 8  (predict for XP_040971821.1)
other 8  (predict for XP_040971822.1)
other 8  (predict for XP_040971823.1)
other 8  (predict for XP_040971824.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107929816
ghi-r.1
for
107902039
ath-u.5
for
AT1G16800
bra-r.6
for
103842833
bna-r.1
for
106415536
bna-r.1
for
106415406
cit-r.1
for
102613021
gma-u.5
for
102663671
vvi-u.5
for
100265030
ppo-u.5
for
7455514
mtr-u.5
for
25488022
sly-u.5
for
101249343
sot-r.1
for
102601107
nta-r.1
for
107766927
nta-r.1
for
107793267
osa-u.5
for
107278869
zma-u.5
for
103632948
tae-r.2
for
123121993
tae-r.2
for
123112482
hvu-r.1
for
123399545
sbi-r.1
for
8055887
bdi-r.1
for
100835663


Ortholog ID: 11774
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC107929816 LOC107902039 AT1G16800 LOC103842833 LOC106415536 LOC106415406 LOC102613021 LOC102663671 LOC100265030 LOC7455514 LOC25488022 LOC101249343 LOC102601107 LOC107766927 LOC107793267 LOC107278869 LOC103632948 LOC123121993 LOC123112482 LOC123399545 LOC8055887 LOC100835663
Function* uncharacterized LOC107929816 uncharacterized LOC107902039 P-loop containing nucleoside triphosphate hydrolases superfamily protein helicase SEN1 helicase SEN1 helicase SEN1 helicase SEN1 uncharacterized LOC102663671 uncharacterized LOC100265030 helicase SEN1 uncharacterized ATP-dependent helicase C29A10.10c uncharacterized LOC101249343 uncharacterized LOC102601107 uncharacterized LOC107766927 uncharacterized LOC107793267 uncharacterized ATP-dependent helicase C29A10.10c helicase SEN1 uncharacterized LOC123121993 uncharacterized LOC123112482 uncharacterized LOC123399545 uncharacterized LOC8055887 uncharacterized LOC100835663
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 5
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03040 Spliceosome 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03040 Spliceosome 5
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03018 RNA degradation 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107929816 107902039 838251 103842833 106415536 106415406 102613021 102663671 100265030 7455514 25488022 101249343 102601107 107766927 107793267 107278869 103632948 123121993 123112482 123399545 8055887 100835663
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