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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107962048  GATA transcription factor 11 
 ghi-r.1  107963298  GATA transcription factor 11 
 ghi-r.1  107940120  GATA transcription factor 11 
 ath-u.5  GATA10  GATA transcription factor 10 
 ath-u.5  GATA11  GATA transcription factor 11 
 bra-r.6  103843419  GATA transcription factor 11 
 bra-r.6  103871545  GATA transcription factor 11 
 bra-r.6  103864881  GATA transcription factor 11 
 bna-r.1  106401524  GATA transcription factor 11 
 bna-r.1  106352595  GATA transcription factor 11 
 bna-r.1  106346369  GATA transcription factor 11-like 
 cit-r.1  102623205  GATA transcription factor 11-like 
 gma-u.5  100813303  GATA transcription factor 11 
 gma-u.5  100781869  GATA transcription factor 11 
 gma-u.5  100778675  GATA transcription factor 11 
 ppo-u.5  18098205  GATA transcription factor 11 
 mtr-u.5  25492439  GATA transcription factor 11 
 mtr-u.5  11427763  GATA transcription factor 11 
 sly-u.5  101260792  GATA transcription factor 11 
 sly-u.5  101258380  GATA transcription factor 11-like 
 sot-r.1  102586537  GATA transcription factor 11-like 
 nta-r.1  107831475  GATA transcription factor 11-like 
 nta-r.1  107827999  GATA transcription factor 11 
 nta-r.1  107788777  GATA transcription factor 11 

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Top 50 coexpressed genes to 107962048 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962048 (ghi-r.1 coexpression data)

CoexMap"107930071"


ghiLOC107930071 | Entrez gene ID : 107930071
Species ghi ath bra bna cit gma ppo mtr sly sot nta zma cre sbi tae osa hvu vvi bdi
Paralog 3 2 3 3 1 3 1 2 2 1 3 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030154 [list] [network] cell differentiation  (210 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
Protein XP_016717156.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_016717156.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_016717156.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107962048


ghi-r.1
for
107963298


ghi-r.1
for
107940120


ath-u.5
for
GATA10


ath-u.5
for
GATA11


bra-r.6
for
103843419


bra-r.6
for
103871545


bra-r.6
for
103864881


bna-r.1
for
106401524


bna-r.1
for
106352595


bna-r.1
for
106346369


cit-r.1
for
102623205


gma-u.5
for
100813303


gma-u.5
for
100781869


gma-u.5
for
100778675


ppo-u.5
for
18098205


mtr-u.5
for
25492439


mtr-u.5
for
11427763


sly-u.5
for
101260792


sly-u.5
for
101258380


sot-r.1
for
102586537


nta-r.1
for
107831475


nta-r.1
for
107827999


nta-r.1
for
107788777



Ortholog ID: 4353
Species ghi ghi ath ath bra bra bra bna bna bna cit gma gma gma ppo mtr mtr sly sly sot nta nta nta
Symbol LOC107963298 LOC107940120 GATA10 GATA11 LOC103843419 LOC103871545 LOC103864881 LOC111197793 LOC106446876 LOC106415440 LOC102623205 LOC100781869 LOC100778675 LOC100815208 LOC18098205 LOC25492439 LOC11427763 LOC101260792 LOC101258380 LOC102586537 LOC107831475 LOC107827999 LOC107806391
Function* GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 10 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 putative GATA transcription factor 13 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11-like GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11 GATA transcription factor 11-like GATA transcription factor 11-like GATA transcription factor 11-like GATA transcription factor 11 GATA transcription factor 11
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107963298 107940120 837315 837316 103843419 103871545 103864881 111197793 106446876 106415440 102623205 100781869 100778675 100815208 18098205 25492439 11427763 101260792 101258380 102586537 107831475 107827999 107806391
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