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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107930527   amino acid transporter AVT6A 
 ghi-r.1   107916646   amino acid transporter AVT6A 
 ghi-r.1   107917706   amino acid transporter AVT6A 
 ghi-r.1   107908345   amino acid transporter AVT6B 
 ath-u.5   AT2G40420   Transmembrane amino acid transporter family protein 
 ath-u.5   AT3G30390   Transmembrane amino acid transporter family protein 
 ath-u.5   AT3G56200   Transmembrane amino acid transporter family protein 
 bra-r.6   103830440   amino acid transporter AVT6E 
 bra-r.6   103875056   amino acid transporter AVT6A 
 bra-r.6   103865795   amino acid transporter AVT6D 
 bna-r.1   125581653   amino acid transporter AVT6E-like 
 bna-r.1   106402515   amino acid transporter AVT6E-like 
 cit-r.1   102628569   amino acid transporter AVT6C 
 cit-r.1   102623353   amino acid transporter AVT6A 
 cit-r.1   102611275   amino acid transporter AVT6A-like 
 gma-u.5   100796345   amino acid transporter family protein 
 gma-u.5   100799425   amino acid transporter AVT6B 
 gma-u.5   100800330   amino acid transporter AVT6C 
 vvi-u.5   100261172   amino acid transporter AVT6E 
 vvi-u.5   100255327   amino acid transporter AVT6C 
 vvi-u.5   100258371   amino acid transporter AVT6A 
 ppo-u.5   7464604   amino acid transporter AVT6C 
 ppo-u.5   18096680   amino acid transporter AVT6E 
 ppo-u.5   18097651   amino acid transporter AVT6A 
 mtr-u.5   25495478   amino acid transporter AVT6B 
 mtr-u.5   25495479   amino acid transporter AVT6A 
 mtr-u.5   25481310   amino acid transporter AVT6A 
 sly-u.5   101247382   amino acid transporter AVT6A 
 sly-u.5   101267241   amino acid transporter AVT6C 
 sot-r.1   102597524   probable sodium-coupled neutral amino acid transporter 6 
 sot-r.1   102602073   putative sodium-coupled neutral amino acid transporter 7 
 sot-r.1   102594925   probable sodium-coupled neutral amino acid transporter 6 
 nta-r.1   107769341   amino acid transporter AVT6A 
 nta-r.1   107771831   amino acid transporter AVT6A 
 nta-r.1   107772624   amino acid transporter AVT6C 
 osa-u.5   4341650   amino acid transporter AVT6E 
 osa-u.5   4327515   amino acid transporter AVT6C 
 zma-u.5   100273225   uncharacterized LOC100273225 
 zma-u.5   100283030   Amino acid transporter-like protein 
 zma-u.5   100193855   uncharacterized LOC100193855 
 tae-r.2   123165078   amino acid transporter AVT6E 
 tae-r.2   123127199   amino acid transporter AVT6A 
 hvu-r.1   123409892   amino acid transporter AVT6E 
 hvu-r.1   123407618   amino acid transporter AVT6A-like 
 hvu-r.1   123407659   amino acid transporter AVT6A-like 
 sbi-r.1   110434582   sodium-coupled neutral amino acid transporter 1-like 
 sbi-r.1   8076392   probable sodium-coupled neutral amino acid transporter 6 
 bdi-r.1   100840415   amino acid transporter AVT6C 
 bdi-r.1   100834084   amino acid transporter AVT6E 
 bdi-r.1   100829076   amino acid transporter AVT6A 
 cre-r.1   CHLRE_02g145700v5   uncharacterized protein 
 cre-r.1   CHLRE_02g145750v5   uncharacterized protein 

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Top 50 coexpressed genes to 107930527 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107930527 (ghi-r.1 coexpression data)

CoexMap"107930527"


ghiLOC107930527 | Entrez gene ID : 107930527    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 2 3 3 3 3 3 2 3 3 2 3 2 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0003333 [list] [network] amino acid transmembrane transport  (143 genes)  IEA  
GO CC
GO MF
GO:0015179 [list] [network] L-amino acid transmembrane transporter activity  (61 genes)  IEA  
Protein XP_016717686.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  chlo_mito 2,  plas 2,  mito 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_016717686.2)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_016717686.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107930527
ghi-r.1
for
107916646
ghi-r.1
for
107917706
ghi-r.1
for
107908345
ath-u.5
for
AT2G40420
ath-u.5
for
AT3G30390
ath-u.5
for
AT3G56200
bra-r.6
for
103830440
bra-r.6
for
103875056
bra-r.6
for
103865795
bna-r.1
for
125581653
bna-r.1
for
106402515
cit-r.1
for
102628569
cit-r.1
for
102623353
cit-r.1
for
102611275
gma-u.5
for
100796345
gma-u.5
for
100799425
gma-u.5
for
100800330
vvi-u.5
for
100261172
vvi-u.5
for
100255327
vvi-u.5
for
100258371
ppo-u.5
for
7464604
ppo-u.5
for
18096680
ppo-u.5
for
18097651
mtr-u.5
for
25495478
mtr-u.5
for
25495479
mtr-u.5
for
25481310
sly-u.5
for
101247382
sly-u.5
for
101267241
sot-r.1
for
102597524
sot-r.1
for
102602073
sot-r.1
for
102594925
nta-r.1
for
107769341
nta-r.1
for
107771831
nta-r.1
for
107772624
osa-u.5
for
4341650
osa-u.5
for
4327515
zma-u.5
for
100273225
zma-u.5
for
100283030
zma-u.5
for
100193855
tae-r.2
for
123165078
tae-r.2
for
123127199
hvu-r.1
for
123409892
hvu-r.1
for
123407618
hvu-r.1
for
123407659
sbi-r.1
for
110434582
sbi-r.1
for
8076392
bdi-r.1
for
100840415
bdi-r.1
for
100834084
bdi-r.1
for
100829076
cre-r.1
for
CHLRE_02g145700v5
cre-r.1
for
CHLRE_02g145750v5


Ortholog ID: 255
Species ghi ghi ghi ath ath bra bra bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae hvu hvu hvu sbi sbi bdi bdi cre cre
Symbol LOC107891994 LOC107955210 LOC107951136 AT2G40420 AT1G80510 LOC103837226 LOC103832479 LOC106402309 LOC106410273 LOC102623353 LOC102611275 LOC102606926 LOC100813056 LOC100791860 LOC100813328 LOC100261172 LOC100255327 LOC100258371 LOC18096680 LOC7473026 LOC18107457 LOC25481310 LOC11425903 LOC11428657 LOC101266946 LOC101261601 LOC101253654 LOC102602073 LOC102601737 LOC102579786 LOC107779616 LOC107760213 LOC107825488 LOC4340751 LOC4341591 LOC100273225 LOC100193855 LOC123071247 LOC123165452 LOC123407618 LOC123445006 LOC123400961 LOC110434582 LOC8058406 LOC100834084 LOC100843851 CHLRE_02g145700v5 CHLRE_02g145750v5
Function* amino acid transporter AVT6A amino acid transporter AVT6C amino acid transporter AVT6A Transmembrane amino acid transporter family protein Transmembrane amino acid transporter family protein amino acid transporter AVT6A amino acid transporter AVT6E amino acid transporter AVT6A amino acid transporter AVT6A amino acid transporter AVT6A amino acid transporter AVT6A-like amino acid transporter AVT6E amino acid transporter AVT6C amino acid transporter AVT6E amino acid transporter AVT6E amino acid transporter AVT6E amino acid transporter AVT6C amino acid transporter AVT6A amino acid transporter AVT6E amino acid transporter AVT6E amino acid transporter AVT6A amino acid transporter AVT6A amino acid transporter AVT6E amino acid transporter AVT6C amino acid transporter AVT6C-like amino acid transporter AVT6E amino acid transporter AVT6A putative sodium-coupled neutral amino acid transporter 7 probable sodium-coupled neutral amino acid transporter 6 sodium-coupled neutral amino acid transporter 5-like amino acid transporter AVT6C-like amino acid transporter AVT6A-like amino acid transporter AVT6A amino acid transporter AVT6A amino acid transporter AVT6A uncharacterized LOC100273225 uncharacterized LOC100193855 amino acid transporter AVT6C amino acid transporter AVT6A amino acid transporter AVT6A-like amino acid transporter AVT6C-like amino acid transporter AVT6A-like sodium-coupled neutral amino acid transporter 1-like probable sodium-coupled neutral amino acid transporter 6 amino acid transporter AVT6E amino acid transporter AVT6A uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 6
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 5
ath00640 Propanoate metabolism 3
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00510 N-Glycan biosynthesis 3
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00280 Valine, leucine and isoleucine degradation 5
bra01200 Carbon metabolism 4
bra00410 beta-Alanine metabolism 3
bra00330 Arginine and proline metabolism 2
bra00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma04141 Protein processing in endoplasmic reticulum 2
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00514 Other types of O-glycan biosynthesis 4
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 5
vvi04075 Plant hormone signal transduction 4
vvi00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 6
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 3
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04142 Lysosome 2
mtr00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 4
sot00071 Fatty acid degradation 3
sot00592 alpha-Linolenic acid metabolism 3
sot01212 Fatty acid metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 3
sot04120 Ubiquitin mediated proteolysis 2
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 10
nta04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 6
nta04075 Plant hormone signal transduction 5
nta00053 Ascorbate and aldarate metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00940 Phenylpropanoid biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 3
zma00630 Glyoxylate and dicarboxylate metabolism 2
zma01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
tae04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi00500 Starch and sucrose metabolism 3
sbi00071 Fatty acid degradation 2
sbi00410 beta-Alanine metabolism 2
sbi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 3
sbi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00920 Sulfur metabolism 3
cre01320 Sulfur cycle 3
cre00230 Purine metabolism 2
cre00261 Monobactam biosynthesis 2
cre00450 Selenocompound metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107891994 107955210 107951136 818635 844390 103837226 103832479 106402309 106410273 102623353 102611275 102606926 100813056 100791860 100813328 100261172 100255327 100258371 18096680 7473026 18107457 25481310 11425903 11428657 101266946 101261601 101253654 102602073 102601737 102579786 107779616 107760213 107825488 4340751 4341591 100273225 100193855 123071247 123165452 123407618 123445006 123400961 110434582 8058406 100834084 100843851 5720510 5720511
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