ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107932144	tuberculostearic acid methyltransferase UfaA1-like
ghi-r.1	107944247	tuberculostearic acid methyltransferase UfaA1
ghi-r.1	107929039	uncharacterized LOC107929039
ghi-r.1	107930318	uncharacterized LOC107930318
ath-u.5	AT3G23510	Cyclopropane-fatty-acyl-phospholipid synthase
ath-u.5	AT3G23530	Cyclopropane-fatty-acyl-phospholipid synthase
bra-r.6	103860003	uncharacterized LOC103860003
bra-r.6	103828731	uncharacterized LOC103828731
bra-r.6	103828740	uncharacterized LOC103828740
bna-r.1	106373789	uncharacterized LOC106373789
bna-r.1	106357883	uncharacterized LOC106357883
bna-r.1	106357875	uncharacterized LOC106357875
cit-r.1	102612222	uncharacterized LOC102612222
cit-r.1	102615883	uncharacterized LOC102615883
cit-r.1	102611924	uncharacterized LOC102611924
gma-u.5	100801659	tuberculostearic acid methyltransferase UfaA1
gma-u.5	100815937	tuberculostearic acid methyltransferase UfaA1
vvi-u.5	100249441	uncharacterized LOC100249441
vvi-u.5	100242555	uncharacterized LOC100242555
ppo-u.5	7473472	sphingolipid C9-methyltransferase 2
ppo-u.5	7459982	uncharacterized LOC7459982
mtr-u.5	25484389	uncharacterized LOC25484389
sly-u.5	101260476	uncharacterized LOC101260476
sly-u.5	101256851	uncharacterized LOC101256851
sot-r.1	102590304	uncharacterized LOC102590304
sot-r.1	102579763	uncharacterized LOC102579763
sot-r.1	102604983	uncharacterized LOC102604983
nta-r.1	107814060	uncharacterized LOC107814060
nta-r.1	107785407	uncharacterized LOC107785407
nta-r.1	107780832	uncharacterized LOC107780832
osa-u.5	4343210	uncharacterized LOC4343210
osa-u.5	4351940	uncharacterized LOC4351940
zma-u.5	103643302	Cyclopropane-fatty-acyl-phospholipid synthase
zma-u.5	103652693	Cyclopropane-fatty-acyl-phospholipid synthase
zma-u.5	100281392	cyclopropane fatty acid synthase
tae-r.2	123055102	uncharacterized LOC123055102
tae-r.2	123172247	uncharacterized LOC123172247
tae-r.2	123187115	uncharacterized LOC123187115
hvu-r.1	123424456	uncharacterized LOC123424456
hvu-r.1	123424457	uncharacterized LOC123424457
sbi-r.1	8070246	uncharacterized LOC8070246
sbi-r.1	8085994	uncharacterized LOC8085994
bdi-r.1	100842201	uncharacterized LOC100842201
bdi-r.1	112268524	uncharacterized LOC112268524
cre-r.1	CHLRE_06g281250v5	uncharacterized protein

Top 50 coexpressed genes to 107932144 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107932144 (ghi-r.1 coexpression data)

CoexMap"107932144"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0008610 [list] [network] lipid biosynthetic process

(1117 genes)

IEA

GO CC

GO MF

GO:0008168 [list] [network] methyltransferase activity	(698 genes)	IEA
GO:0016491 [list] [network] oxidoreductase activity	(3258 genes)	IEA

Protein

NP_001314272.1 [sequence] [blastp]
XP_016719580.2 [sequence] [blastp]
XP_016719582.1 [sequence] [blastp]
XP_016719583.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, cyto_E.R. 3, chlo 1, nucl 1, mito 1, plas 1, vacu 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for NP_001314272.1)
cyto 5, cyto_E.R. 3, chlo 1, nucl 1, mito 1, plas 1, vacu 1, golg 1, chlo_mito 1, nucl_plas 1, golg_plas 1, mito_plas 1	(predict for XP_016719580.2)
chlo 9, chlo_mito 5	(predict for XP_016719582.1)
chlo 8, nucl 1, cyto 1, mito 1, cyto_nucl 1	(predict for XP_016719583.1)

Subcellular
localization
TargetP

scret 7, other 4	(predict for NP_001314272.1)
scret 7, other 4	(predict for XP_016719580.2)
chlo 3	(predict for XP_016719582.1)
other 3	(predict for XP_016719583.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107932144	ghi-r.1 for 107944247	ghi-r.1 for 107929039	ghi-r.1 for 107930318	ath-u.5 for AT3G23510	ath-u.5 for AT3G23530	bra-r.6 for 103860003	bra-r.6 for 103828731	bra-r.6 for 103828740	bna-r.1 for 106373789	bna-r.1 for 106357883	bna-r.1 for 106357875	cit-r.1 for 102612222	cit-r.1 for 102615883	cit-r.1 for 102611924	gma-u.5 for 100801659	gma-u.5 for 100815937	vvi-u.5 for 100249441	vvi-u.5 for 100242555	ppo-u.5 for 7473472	ppo-u.5 for 7459982	mtr-u.5 for 25484389	sly-u.5 for 101260476	sly-u.5 for 101256851	sot-r.1 for 102590304	sot-r.1 for 102579763	sot-r.1 for 102604983	nta-r.1 for 107814060	nta-r.1 for 107785407	nta-r.1 for 107780832	osa-u.5 for 4343210	osa-u.5 for 4351940	zma-u.5 for 103643302	zma-u.5 for 103652693	zma-u.5 for 100281392	tae-r.2 for 123055102	tae-r.2 for 123172247	tae-r.2 for 123187115	hvu-r.1 for 123424456	hvu-r.1 for 123424457	sbi-r.1 for 8070246	sbi-r.1 for 8085994	bdi-r.1 for 100842201	bdi-r.1 for 112268524	cre-r.1 for CHLRE_06g281250v5

Ortholog

Ortholog ID: 2475

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

sbi

bdi

cre

Symbol

Function^*

tuberculostearic acid methyltransferase UfaA1

uncharacterized LOC107929039

uncharacterized LOC107930318

Cyclopropane-fatty-acyl-phospholipid synthase

uncharacterized LOC103860003

uncharacterized LOC103828740

uncharacterized LOC103828879

uncharacterized LOC106357883

uncharacterized LOC106357875

uncharacterized LOC106435679

uncharacterized LOC102612222

uncharacterized LOC102615883

uncharacterized LOC102611924

tuberculostearic acid methyltransferase UfaA1

uncharacterized LOC100249441

uncharacterized LOC100242555

sphingolipid C9-methyltransferase 2

uncharacterized LOC7459982

uncharacterized LOC25484389

uncharacterized LOC101260476

uncharacterized LOC101256851

uncharacterized LOC102590304

uncharacterized LOC102579763

uncharacterized LOC102604983

uncharacterized LOC107765268

uncharacterized LOC107760898

uncharacterized LOC142178960

uncharacterized LOC4343210

uncharacterized LOC4351940

Cyclopropane-fatty-acyl-phospholipid synthase

cyclopropane fatty acid synthase

uncharacterized LOC123172247

uncharacterized LOC123187115

uncharacterized LOC123043294

uncharacterized LOC8070246

uncharacterized LOC8085994

uncharacterized LOC100842201

uncharacterized LOC112268524

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	5
ath00260	Glycine, serine and threonine metabolism	3
ath01210	2-Oxocarboxylic acid metabolism	3
ath00261	Monobactam biosynthesis	2
ath00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00071	Fatty acid degradation	3
bra01212	Fatty acid metabolism	3
bra04136	Autophagy - other	2
bra00240	Pyrimidine metabolism	2
bra00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00904	Diterpenoid biosynthesis	2
gma00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00860	Porphyrin metabolism	2
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi01200	Carbon metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00760	Nicotinate and nicotinamide metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	4
tae00630	Glyoxylate and dicarboxylate metabolism	3
tae00260	Glycine, serine and threonine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00630	Glyoxylate and dicarboxylate metabolism	2
tae01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107944247

107929039

107930318

821931

821932

103860003

103828740

103828879

106357883

106357875

106435679

102612222

102615883

102611924

100801659

100815937

100249441

100242555

7473472

7459982

25484389

101260476

101256851

102590304

102579763

102604983

107765268

107760898

142178960

4343210

4351940

103643302

103652693

100281392

123172247

123187115

123043294

8070246

8085994

100842201

112268524

5720925

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	3	3	2	2	2	1	2	3	3	2	3	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107932144 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107932144 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**