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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107932565   beta-1,4-xylosyltransferase IRX14 
 ghi-r.1   107901623   probable beta-1,4-xylosyltransferase IRX14 
 ghi-r.1   107931672   beta-1,4-xylosyltransferase IRX14 
 ath-u.5   IRX14   Nucleotide-diphospho-sugar transferases superfamily protein 
 ath-u.5   IRX14-L   Nucleotide-diphospho-sugar transferases superfamily protein 
 bra-r.6   103829526   probable beta-1,4-xylosyltransferase IRX14H 
 bra-r.6   103861947   probable beta-1,4-xylosyltransferase IRX14 
 bna-r.1   106366787   probable beta-1,4-xylosyltransferase IRX14H 
 bna-r.1   106426865   beta-1,4-xylosyltransferase IRX14 
 bna-r.1   106439348   beta-1,4-xylosyltransferase IRX14 
 cit-r.1   102627060   probable beta-1,4-xylosyltransferase IRX14H 
 gma-u.5   100788223   beta-1,4-xylosyltransferase IRX14 
 gma-u.5   100777505   beta-1,4-xylosyltransferase IRX14 
 gma-u.5   PGLCAT8   glycosyltransferase 
 vvi-u.5   100266466   probable beta-1,4-xylosyltransferase IRX14H 
 ppo-u.5   7476399   probable beta-1,4-xylosyltransferase IRX14H 
 ppo-u.5   7462594   beta-1,4-xylosyltransferase IRX14 
 mtr-u.5   25493486   probable beta-1,4-xylosyltransferase IRX14H 
 mtr-u.5   11408559   probable beta-1,4-xylosyltransferase IRX14H 
 sly-u.5   pglcat8   glycosyltransferase 
 sot-r.1   102581104   probable beta-1,4-xylosyltransferase IRX14 
 nta-r.1   107769571   beta-1,4-xylosyltransferase IRX14 
 nta-r.1   107796855   beta-1,4-xylosyltransferase IRX14 
 osa-u.5   IRX14   probable glucuronosyltransferase Os06g0687900 
 zma-u.5   103629620   probable beta-1,4-xylosyltransferase IRX14 
 zma-u.5   606446   glycosyltransferase 
 tae-r.2   123156518   probable beta-1,4-xylosyltransferase IRX14 
 tae-r.2   123170097   probable beta-1,4-xylosyltransferase IRX14 
 tae-r.2   606375   probable beta-1,4-xylosyltransferase IRX14 
 hvu-r.1   123407014   probable beta-1,4-xylosyltransferase IRX14 
 sbi-r.1   8063780   probable glucuronosyltransferase Os06g0687900 
 bdi-r.1   100828169   probable glucuronosyltransferase Os06g0687900 

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Top 50 coexpressed genes to 107932565 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107932565 (ghi-r.1 coexpression data)

CoexMap"107932565"


ghiLOC107932565 | Entrez gene ID : 107932565    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 2 3 1 3 1 2 2 1 1 2 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010417 [list] [network] glucuronoxylan biosynthetic process  (25 genes)  IEA  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (79 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (243 genes)  IEA  
GO MF
GO:0015018 [list] [network] galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity  (16 genes)  IEA  
GO:0042285 [list] [network] xylosyltransferase activity  (25 genes)  IEA  
Protein XP_016720096.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 3,  extr 1,  cyto_mito 1  (predict for XP_016720096.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_016720096.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107932565
ghi-r.1
for
107901623
ghi-r.1
for
107931672
ath-u.5
for
IRX14
ath-u.5
for
IRX14-L
bra-r.6
for
103829526
bra-r.6
for
103861947
bna-r.1
for
106366787
bna-r.1
for
106426865
bna-r.1
for
106439348
cit-r.1
for
102627060
gma-u.5
for
100788223
gma-u.5
for
100777505
gma-u.5
for
PGLCAT8
vvi-u.5
for
100266466
ppo-u.5
for
7476399
ppo-u.5
for
7462594
mtr-u.5
for
25493486
mtr-u.5
for
11408559
sly-u.5
for
pglcat8
sot-r.1
for
102581104
nta-r.1
for
107769571
nta-r.1
for
107796855
osa-u.5
for
IRX14
zma-u.5
for
103629620
zma-u.5
for
606446
tae-r.2
for
123156518
tae-r.2
for
123170097
tae-r.2
for
606375
hvu-r.1
for
123407014
sbi-r.1
for
8063780
bdi-r.1
for
100828169


Ortholog ID: 6637
Species ghi ghi ghi ath ath bra bra bna bna bna cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107932565 LOC107901623 LOC107931672 IRX14 IRX14-L LOC103829526 LOC103861947 LOC106366787 LOC106426865 LOC106439348 LOC102627060 LOC100777505 PGLCAT8 LOC100804618 LOC100266466 LOC7476399 LOC7462594 LOC25493486 LOC11408559 pglcat8 LOC102581104 LOC107769571 LOC107796855 IRX14 LOC103629620 LOC606446 LOC123156518 LOC123170097 LOC606375 LOC123407014 LOC8063780 LOC100828169
Function* beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 Nucleotide-diphospho-sugar transferases superfamily protein Nucleotide-diphospho-sugar transferases superfamily protein probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H beta-1,4-xylosyltransferase IRX14 glycosyltransferase beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14H beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14H probable beta-1,4-xylosyltransferase IRX14H glycosyltransferase probable beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 beta-1,4-xylosyltransferase IRX14 probable glucuronosyltransferase Os06g0687900 probable beta-1,4-xylosyltransferase IRX14 glycosyltransferase probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14 probable beta-1,4-xylosyltransferase IRX14 probable glucuronosyltransferase Os06g0687900 probable glucuronosyltransferase Os06g0687900
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 4
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath04141 Protein processing in endoplasmic reticulum 2
ath00510 N-Glycan biosynthesis 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00541 Biosynthesis of various nucleotide sugars 4
bra01250 Biosynthesis of nucleotide sugars 4
bra01240 Biosynthesis of cofactors 4
bra00040 Pentose and glucuronate interconversions 3
bra00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00531 Glycosaminoglycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 2
gma00053 Ascorbate and aldarate metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma00541 Biosynthesis of various nucleotide sugars 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 10
ppo01230 Biosynthesis of amino acids 9
ppo00270 Cysteine and methionine metabolism 8
ppo01200 Carbon metabolism 6
ppo01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 4
ppo01250 Biosynthesis of nucleotide sugars 4
ppo00053 Ascorbate and aldarate metabolism 3
ppo01240 Biosynthesis of cofactors 3
ppo00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00270 Cysteine and methionine metabolism 3
zma00670 One carbon pool by folate 3
zma01240 Biosynthesis of cofactors 3
zma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 4
sbi01230 Biosynthesis of amino acids 4
sbi00670 One carbon pool by folate 3
sbi00999 Biosynthesis of various plant secondary metabolites 3
sbi01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107932565 107901623 107931672 829842 836858 103829526 103861947 106366787 106426865 106439348 102627060 100777505 732550 100804618 100266466 7476399 7462594 25493486 11408559 778207 102581104 107769571 107796855 4341895 103629620 606446 123156518 123170097 606375 123407014 8063780 100828169
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