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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107937408   DCN1-like protein 1 
 ath-u.5   AAR3   defective in cullin neddylation protein (DUF298) 
 gma-u.5   100792801   DCN1-like protein 2 
 gma-u.5   100789142   DCN1-like protein 2 
 vvi-u.5   100264659   defective in cullin neddylation protein AAR3 
 ppo-u.5   7495980   defective in cullin neddylation protein AAR3 
 ppo-u.5   7472598   defective in cullin neddylation protein AAR3 
 mtr-u.5   11415238   DCN1-like protein 3 
 sly-u.5   101252544   defective in cullin neddylation protein AAR3 
 osa-u.5   4343995   defective in cullin neddylation protein 1 
 zma-u.5   100277354   uncharacterized LOC100277354 

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Top 50 coexpressed genes to 107937408 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107937408 (ghi-r.1 coexpression data)

CoexMap"107937408"


ghiLOC107937408 | Entrez gene ID : 107937408    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045116 [list] [network] protein neddylation  (22 genes)  IEA  
GO CC
GO:0000151 [list] [network] ubiquitin ligase complex  (426 genes)  IEA  
GO MF
GO:0097602 [list] [network] cullin family protein binding  (46 genes)  IEA  
GO:0031624 [list] [network] ubiquitin conjugating enzyme binding  (55 genes)  IEA  
GO:0032182 [list] [network] ubiquitin-like protein binding  (184 genes)  IEA  
Protein XP_040947305.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  plas 1,  golg_plas 1,  mito 1,  cysk 1  (predict for XP_040947305.1)
Subcellular
localization
TargetP
other 6,  mito 6  (predict for XP_040947305.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107937408
ath-u.5
for
AAR3
gma-u.5
for
100792801
gma-u.5
for
100789142
vvi-u.5
for
100264659
ppo-u.5
for
7495980
ppo-u.5
for
7472598
mtr-u.5
for
11415238
sly-u.5
for
101252544
osa-u.5
for
4343995
zma-u.5
for
100277354


Ortholog ID: 7603
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC107960358 LOC121216294 AAR3 LOC103875112 LOC103854167 LOC106371122 LOC106349141 LOC102615154 LOC100789142 LOC100792801 LOC100264659 LOC7495980 LOC7472598 LOC11415238 LOC101252544 LOC102582781 LOC107812616 LOC107778351 LOC4343995 LOC100277354 LOC123044107 LOC123187856 LOC123425191 LOC110432493 LOC100832928 CHLRE_12g488250v5
Function* DCN1-like protein uncharacterized LOC121216294 defective in cullin neddylation protein (DUF298) uncharacterized LOC103875112 uncharacterized LOC103854167 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein AAR3-like defective in cullin neddylation protein AAR3 DCN1-like protein 2 DCN1-like protein 2 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein AAR3 DCN1-like protein 3 defective in cullin neddylation protein AAR3 DCN1-like protein 2 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein 1 uncharacterized LOC100277354 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein AAR3 defective in cullin neddylation protein 1 uncharacterized LOC100832928 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 3
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit00190 Oxidative phosphorylation 3
cit04145 Phagosome 3
cit04136 Autophagy - other 2
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04130 SNARE interactions in vesicular transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 5
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04148 Efferocytosis 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
tae04142 Lysosome 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 2
tae04148 Efferocytosis 2
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107960358 121216294 822537 103875112 103854167 106371122 106349141 102615154 100789142 100792801 100264659 7495980 7472598 11415238 101252544 102582781 107812616 107778351 4343995 100277354 123044107 123187856 123425191 110432493 100832928 5716661
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