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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107937512   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 ghi-r.1   107954170   solanesyl-diphosphate synthase 1, mitochondrial 
 ghi-r.1   107953314   solanesyl-diphosphate synthase 1, mitochondrial 
 ghi-r.1   107913810   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 ath-u.5   GPS1   geranyl diphosphate synthase 1 
 bra-r.6   103857539   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 bna-r.1   106447487   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 bna-r.1   106437826   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 bna-r.1   106406335   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 cit-r.1   102624826   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like 
 cit-r.1   102625110   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 gma-u.5   100792725   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 gma-u.5   100780374   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 vvi-u.5   100232946   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 ppo-u.5   7489405   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 ppo-u.5   7479520   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 mtr-u.5   25493517   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 sly-u.5   GPS   geranyl pyrophosphate synthase 
 sot-r.1   102588989   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 nta-r.1   107781844   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like 
 nta-r.1   107776134   solanesyl diphosphate synthase 3, chloroplastic/mitochondrial 
 osa-u.5   4341844   solanesyl-diphosphate synthase 1, mitochondrial-like 
 zma-u.5   103626280   solanesyl-diphosphate synthase 1, mitochondrial 
 zma-u.5   100279314   decaprenyl-diphosphate synthase subunit 1 
 tae-r.2   123149070   solanesyl-diphosphate synthase 1, mitochondrial 
 tae-r.2   123156930   solanesyl-diphosphate synthase 1, mitochondrial 
 tae-r.2   123165008   solanesyl-diphosphate synthase 1, mitochondrial 
 hvu-r.1   123410284   solanesyl-diphosphate synthase 1, mitochondrial 
 sbi-r.1   8061614   solanesyl-diphosphate synthase 1, mitochondrial 
 bdi-r.1   100837237   solanesyl-diphosphate synthase 1, mitochondrial 
 bdi-r.1   100832081   solanesyl-diphosphate synthase 1, mitochondrial 
 cre-r.1   CHLRE_12g511700v5   uncharacterized protein 

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Top 50 coexpressed genes to 107937512 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107937512 (ghi-r.1 coexpression data)

CoexMap"107937512"


ghiLOC107937512 | Entrez gene ID : 107937512    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 3 2 2 1 2 1 1 1 2 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00900 [list] [network] Terpenoid backbone biosynthesis (143 genes)
GO BP
GO:0006744 [list] [network] ubiquinone biosynthetic process  (32 genes)  IEA  
GO:0008299 [list] [network] isoprenoid biosynthetic process  (292 genes)  IEA  
GO CC
GO:1990234 [list] [network] transferase complex  (1357 genes)  IEA  
GO MF
GO:0004659 [list] [network] prenyltransferase activity  (81 genes)  IEA  
Protein XP_016725896.1 [sequence] [blastp]
XP_016725897.1 [sequence] [blastp]
XP_016725898.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 2,  E.R. 1,  mito_plas 1  (predict for XP_016725896.1)
chlo 7,  mito 1,  nucl 1,  extr 1,  cyto_mito 1,  mito_plas 1  (predict for XP_016725897.1)
chlo 4,  plas 2,  chlo_mito 2,  E.R. 1,  nucl_plas 1,  cyto_plas 1  (predict for XP_016725898.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_016725896.1)
mito 5  (predict for XP_016725897.1)
other 4,  scret 3  (predict for XP_016725898.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107937512
ghi-r.1
for
107954170
ghi-r.1
for
107953314
ghi-r.1
for
107913810
ath-u.5
for
GPS1
bra-r.6
for
103857539
bna-r.1
for
106447487
bna-r.1
for
106437826
bna-r.1
for
106406335
cit-r.1
for
102624826
cit-r.1
for
102625110
gma-u.5
for
100792725
gma-u.5
for
100780374
vvi-u.5
for
100232946
ppo-u.5
for
7489405
ppo-u.5
for
7479520
mtr-u.5
for
25493517
sly-u.5
for
GPS
sot-r.1
for
102588989
nta-r.1
for
107781844
nta-r.1
for
107776134
osa-u.5
for
4341844
zma-u.5
for
103626280
zma-u.5
for
100279314
tae-r.2
for
123149070
tae-r.2
for
123156930
tae-r.2
for
123165008
hvu-r.1
for
123410284
sbi-r.1
for
8061614
bdi-r.1
for
100837237
bdi-r.1
for
100832081
cre-r.1
for
CHLRE_12g511700v5


Ortholog ID: 5963
Species ghi ghi ghi ath bra bna bna bna cit cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC107937512 LOC107953314 LOC107913810 GPS1 LOC103857539 LOC106447487 LOC125609352 LOC106396189 LOC102624826 LOC102625110 LOC100792725 LOC100780374 LOC100232946 LOC7489405 LOC7479520 LOC25493517 GPS LOC102588989 LOC107781844 LOC107776134 LOC4341844 LOC103626280 LOC100279314 LOC123149070 LOC123156930 LOC123165008 LOC123410284 LOC8061614 LOC100837237 LOC100832081 CHLRE_12g511700v5
Function* solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl-diphosphate synthase 1, mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial geranyl diphosphate synthase 1 solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial geranyl pyrophosphate synthase solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl diphosphate synthase 3, chloroplastic/mitochondrial-like solanesyl diphosphate synthase 3, chloroplastic/mitochondrial solanesyl-diphosphate synthase 1, mitochondrial-like solanesyl-diphosphate synthase 1, mitochondrial decaprenyl-diphosphate synthase subunit 1 solanesyl-diphosphate synthase 1, mitochondrial solanesyl-diphosphate synthase 1, mitochondrial solanesyl-diphosphate synthase 1, mitochondrial solanesyl-diphosphate synthase 1, mitochondrial solanesyl-diphosphate synthase 1, mitochondrial solanesyl-diphosphate synthase 1, mitochondrial solanesyl-diphosphate synthase 1, mitochondrial uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00902 Monoterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 6
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 2
gma00280 Valine, leucine and isoleucine degradation 2
gma01212 Fatty acid metabolism 2
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot04145 Phagosome 3
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa00020 Citrate cycle (TCA cycle) 5
osa01210 2-Oxocarboxylic acid metabolism 5
osa01230 Biosynthesis of amino acids 4
osa00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00051 Fructose and mannose metabolism 2
sbi01240 Biosynthesis of cofactors 2
sbi01230 Biosynthesis of amino acids 2
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00010 Glycolysis / Gluconeogenesis 2
bdi00020 Citrate cycle (TCA cycle) 2
bdi00620 Pyruvate metabolism 2
bdi00785 Lipoic acid metabolism 2
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107937512 107953314 107913810 818028 103857539 106447487 125609352 106396189 102624826 102625110 100792725 100780374 100232946 7489405 7479520 25493517 778311 102588989 107781844 107776134 4341844 103626280 100279314 123149070 123156930 123165008 123410284 8061614 100837237 100832081 5716593
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