ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107937551	ELMO domain-containing protein C
ghi-r.1	107890024	ELMO domain-containing protein A
ghi-r.1	107893123	ELMO domain-containing protein C
ghi-r.1	107896385	ELMO domain-containing protein A
ath-u.5	AT2G44770	ELMO/CED-12 family protein
ath-u.5	AT3G03610	ELMO/CED-12 family protein
bra-r.6	103862896	ELMO domain-containing protein A
bra-r.6	103858144	ELMO domain-containing protein A
bra-r.6	103855173	ELMO domain-containing protein A
bna-r.1	106413924	ELMO domain-containing protein C
cit-r.1	102630365	uncharacterized LOC102630365
cit-r.1	102623664	uncharacterized LOC102623664
cit-r.1	102624950	uncharacterized LOC102624950
gma-u.5	100800270	ELMO domain-containing protein A
gma-u.5	100800244	ELMO domain-containing protein B
gma-u.5	100799350	ELMO domain-containing protein A
vvi-u.5	100247928	uncharacterized LOC100247928
vvi-u.5	100250039	uncharacterized LOC100250039
vvi-u.5	100259084	uncharacterized LOC100259084
ppo-u.5	18105081	uncharacterized LOC18105081
ppo-u.5	7497382	uncharacterized LOC7497382
ppo-u.5	7493856	uncharacterized LOC7493856
mtr-u.5	11435943	ELMO domain-containing protein A
mtr-u.5	25480747	ELMO domain-containing protein A
mtr-u.5	11426082	ELMO domain-containing protein A
sly-u.5	101254335	uncharacterized LOC101254335
sly-u.5	101257519	uncharacterized LOC101257519
sly-u.5	101260480	uncharacterized LOC101260480
sot-r.1	102579796	ELMO domain-containing protein A-like
sot-r.1	102596974	ELMO domain-containing protein A
sot-r.1	102603992	ELMO domain-containing protein A
nta-r.1	107764215	uncharacterized LOC107764215
nta-r.1	107769490	uncharacterized LOC107769490
nta-r.1	107771679	uncharacterized LOC107771679
osa-u.5	4351385	uncharacterized LOC4351385
osa-u.5	112936014	uncharacterized LOC112936014
osa-u.5	4330174	uncharacterized LOC4330174
zma-u.5	103634598	ELMO domain-containing protein C
zma-u.5	100280027	ELMO/CED-12 family protein
zma-u.5	100274345	uncharacterized LOC100274345
tae-r.2	123083768	uncharacterized LOC123083768
tae-r.2	123051158	ELMO domain-containing protein A
tae-r.2	123096541	ELMO domain-containing protein A
hvu-r.1	123424447	ELMO domain-containing protein A
hvu-r.1	123427412	ELMO domain-containing protein A-like
hvu-r.1	123448219	ELMO domain-containing protein C-like
sbi-r.1	8080232	ELMO domain-containing protein A
sbi-r.1	8076247	ELMO domain-containing protein A
bdi-r.1	100841160	ELMO domain-containing protein A
bdi-r.1	100822997	ELMO domain-containing protein A
bdi-r.1	100830380	ELMO domain-containing protein A
cre-r.1	CHLRE_12g557252v5	uncharacterized protein

Top 50 coexpressed genes to 107937551 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107937551 (ghi-r.1 coexpression data)

CoexMap"107937551"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016725938.1 [sequence] [blastp]
XP_016725945.1 [sequence] [blastp]

Subcellular
localization
wolf

mito 4, nucl 3, chlo 2, cyto_mito 2	(predict for XP_016725938.1)
mito 4, nucl 3, chlo 2, cyto_mito 2	(predict for XP_016725945.1)

Subcellular
localization
TargetP

mito 8, other 7	(predict for XP_016725938.1)
mito 8, other 7	(predict for XP_016725945.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107937551	ghi-r.1 for 107890024	ghi-r.1 for 107893123	ghi-r.1 for 107896385	ath-u.5 for AT2G44770	ath-u.5 for AT3G03610	bra-r.6 for 103862896	bra-r.6 for 103858144	bra-r.6 for 103855173	bna-r.1 for 106413924	cit-r.1 for 102630365	cit-r.1 for 102623664	cit-r.1 for 102624950	gma-u.5 for 100800270	gma-u.5 for 100800244	gma-u.5 for 100799350	vvi-u.5 for 100247928	vvi-u.5 for 100250039	vvi-u.5 for 100259084	ppo-u.5 for 18105081	ppo-u.5 for 7497382	ppo-u.5 for 7493856	mtr-u.5 for 11435943	mtr-u.5 for 25480747	mtr-u.5 for 11426082	sly-u.5 for 101254335	sly-u.5 for 101257519	sly-u.5 for 101260480	sot-r.1 for 102579796	sot-r.1 for 102596974	sot-r.1 for 102603992	nta-r.1 for 107764215	nta-r.1 for 107769490	nta-r.1 for 107771679	osa-u.5 for 4351385	osa-u.5 for 112936014	osa-u.5 for 4330174	zma-u.5 for 103634598	zma-u.5 for 100280027	zma-u.5 for 100274345	tae-r.2 for 123083768	tae-r.2 for 123051158	tae-r.2 for 123096541	hvu-r.1 for 123424447	hvu-r.1 for 123427412	hvu-r.1 for 123448219	sbi-r.1 for 8080232	sbi-r.1 for 8076247	bdi-r.1 for 100841160	bdi-r.1 for 100822997	bdi-r.1 for 100830380	cre-r.1 for CHLRE_12g557252v5

Ortholog

Ortholog ID: 437

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

ELMO domain-containing protein C

ELMO domain-containing protein A

ELMO domain-containing protein B

ELMO/CED-12 family protein

ELMO domain-containing protein A

ELMO domain-containing protein A-like

uncharacterized LOC102623664

uncharacterized LOC102624950

uncharacterized LOC102629693

ELMO domain-containing protein A

ELMO domain-containing protein B

ELMO domain-containing protein A

uncharacterized LOC100247928

uncharacterized LOC100259084

uncharacterized LOC7483801

uncharacterized LOC7494769

ELMO domain-containing protein A

uncharacterized LOC101254335

uncharacterized LOC101257519

uncharacterized LOC101259302

ELMO domain-containing protein A-like

ELMO domain-containing protein A

ELMO domain-containing protein A-like

uncharacterized LOC107771679

uncharacterized LOC107762700

uncharacterized LOC107763718

uncharacterized LOC112936014

uncharacterized LOC4334887

uncharacterized LOC4350523

uncharacterized LOC100192852

ELMO/CED-12 family protein

ELMO domain-containing protein 2

ELMO domain-containing protein A

uncharacterized LOC123097608

ELMO domain-containing protein A-like

ELMO domain-containing protein C-like

ELMO domain-containing protein A

ELMO domain-containing protein C

ELMO domain-containing protein A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00190	Oxidative phosphorylation	2
ghi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00620	Pyruvate metabolism	2
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00905	Brassinosteroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	5
gma04141	Protein processing in endoplasmic reticulum	4
gma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2
ppo04075	Plant hormone signal transduction	2
ppo00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04144	Endocytosis	2
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03050	Proteasome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03083	Polycomb repressive complex	3
sly04712	Circadian rhythm - plant	3
sly03013	Nucleocytoplasmic transport	3
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03410	Base excision repair	6
nta04120	Ubiquitin mediated proteolysis	3
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00380	Tryptophan metabolism	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00500	Starch and sucrose metabolism	2
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	2
zma04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00230	Purine metabolism	2
zma00920	Sulfur metabolism	2
zma01320	Sulfur cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae04141	Protein processing in endoplasmic reticulum	3
tae03050	Proteasome	3
tae04144	Endocytosis	2
tae05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	2
hvu00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00460	Cyanoamino acid metabolism	3
sbi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	5
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01240	Biosynthesis of cofactors	3
bdi00970	Aminoacyl-tRNA biosynthesis	2
bdi01230	Biosynthesis of amino acids	2
bdi00860	Porphyrin metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107937551

107919901

107926296

825197

839448

843060

103855173

103841879

103866154

125599506

125576219

102623664

102624950

102629693

100800270

100789319

100777764

100247928

100259084

7483801

7494769

11435943

25480747

11426082

101254335

101257519

101259302

102579796

102596974

102605961

107771679

107762700

107763718

112936014

4334887

4350523

100192852

100383240

100283240

123054087

123097608

123427412

123448219

123448761

8080232

8083051

110431880

100830380

100840733

5728381

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Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	1	3	3	3	3	3	3	3	3	3	3	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107937551 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107937551 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**