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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107897068   malate dehydrogenase 
 ath-u.5   c-NAD-MDH2   Lactate/malate dehydrogenase family protein 
 ath-u.5   c-NAD-MDH3   Lactate/malate dehydrogenase family protein 
 ath-u.5   c-NAD-MDH1   Lactate/malate dehydrogenase family protein 
 bra-r.6   103836575   malate dehydrogenase 2, cytoplasmic 
 bra-r.6   103845103   malate dehydrogenase 3, cytoplasmic 
 bra-r.6   103839246   malate dehydrogenase 1, cytoplasmic 
 bna-r.1   111200414   malate dehydrogenase 2, cytoplasmic 
 bna-r.1   106366626   malate dehydrogenase 1, cytoplasmic-like 
 bna-r.1   106432835   malate dehydrogenase 3, cytoplasmic 
 cit-r.1   102577998   malate dehydrogenase 
 cit-r.1   102615934   malate dehydrogenase, cytoplasmic-like 
 gma-u.5   100783188   malate dehydrogenase, cytoplasmic 
 gma-u.5   547963   cytosolic malate dehydrogenase 
 gma-u.5   100811402   malate dehydrogenase, cytoplasmic-like 
 vvi-u.5   100248145   malate dehydrogenase, cytoplasmic 
 vvi-u.5   100253273   malate dehydrogenase, cytoplasmic 
 vvi-u.5   100256452   malate dehydrogenase 
 ppo-u.5   18102471   malate dehydrogenase 
 ppo-u.5   7453937   malate dehydrogenase, cytoplasmic 
 ppo-u.5   7467536   malate dehydrogenase 
 mtr-u.5   25484448   malate dehydrogenase 
 mtr-u.5   11436578   malate dehydrogenase, cytoplasmic 
 mtr-u.5   11430390   malate dehydrogenase, cytoplasmic 
 sly-u.5   cMDH   cytosolic malate dehydrogenase 
 sly-u.5   101253131   malate dehydrogenase 
 sot-r.1   102585937   malate dehydrogenase, cytoplasmic-like 
 sot-r.1   102577663   malate dehydrogenase-like protein 
 nta-r.1   107823900   malate dehydrogenase, cytoplasmic 
 nta-r.1   107817292   malate dehydrogenase, cytoplasmic 
 nta-r.1   107810010   malate dehydrogenase-like 
 osa-u.5   4336595   malate dehydrogenase, cytoplasmic-like 
 osa-u.5   4348905   malate dehydrogenase, cytoplasmic-like 
 zma-u.5   542598   malate dehydrogenase 5 
 zma-u.5   100280767   malate dehydrogenase, cytoplasmic 
 tae-r.2   123121388   malate dehydrogenase, cytoplasmic 
 tae-r.2   543356   malate dehydrogenase, cytoplasmic 
 tae-r.2   123181082   malate dehydrogenase, cytoplasmic 
 hvu-r.1   123431137   malate dehydrogenase, cytoplasmic 
 sbi-r.1   8070482   malate dehydrogenase, cytoplasmic 
 bdi-r.1   100841049   malate dehydrogenase, cytoplasmic 
 cre-r.1   CHLRE_02g145800v5   uncharacterized protein 

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Top 50 coexpressed genes to 107897068 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107897068 (ghi-r.1 coexpression data)

CoexMap"107938660"


ghiLOC107938660 | Entrez gene ID : 107938660    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 3 3 3 2 3 3 3 3 2 2 3 2 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00020 [list] [network] Citrate cycle (TCA cycle) (143 genes)
ghi00270 [list] [network] Cysteine and methionine metabolism (291 genes)
ghi00566 [list] [network] Sulfoquinovose metabolism (29 genes)
ghi00620 [list] [network] Pyruvate metabolism (290 genes)
ghi00630 [list] [network] Glyoxylate and dicarboxylate metabolism (192 genes)
ghi00710 [list] [network] Carbon fixation by Calvin cycle (194 genes)
ghi01200 [list] [network] Carbon metabolism (681 genes)
GO BP
GO:0006107 [list] [network] oxaloacetate metabolic process  (13 genes)  IEA  
GO:0006108 [list] [network] malate metabolic process  (59 genes)  IEA  
GO:0006099 [list] [network] tricarboxylic acid cycle  (119 genes)  IEA  
GO CC
GO MF
GO:0030060 [list] [network] L-malate dehydrogenase (NAD+) activity  (23 genes)  IEA  
Protein XP_016727374.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  chlo_mito 1,  pero 1,  cysk_nucl 1  (predict for XP_016727374.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_016727374.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107897068
ath-u.5
for
c-NAD-MDH2
ath-u.5
for
c-NAD-MDH3
ath-u.5
for
c-NAD-MDH1
bra-r.6
for
103836575
bra-r.6
for
103845103
bra-r.6
for
103839246
bna-r.1
for
111200414
bna-r.1
for
106366626
bna-r.1
for
106432835
cit-r.1
for
102577998
cit-r.1
for
102615934
gma-u.5
for
100783188
gma-u.5
for
547963
gma-u.5
for
100811402
vvi-u.5
for
100248145
vvi-u.5
for
100253273
vvi-u.5
for
100256452
ppo-u.5
for
18102471
ppo-u.5
for
7453937
ppo-u.5
for
7467536
mtr-u.5
for
25484448
mtr-u.5
for
11436578
mtr-u.5
for
11430390
sly-u.5
for
cMDH
sly-u.5
for
101253131
sot-r.1
for
102585937
sot-r.1
for
102577663
nta-r.1
for
107823900
nta-r.1
for
107817292
nta-r.1
for
107810010
osa-u.5
for
4336595
osa-u.5
for
4348905
zma-u.5
for
542598
zma-u.5
for
100280767
tae-r.2
for
123121388
tae-r.2
for
543356
tae-r.2
for
123181082
hvu-r.1
for
123431137
sbi-r.1
for
8070482
bdi-r.1
for
100841049
cre-r.1
for
CHLRE_02g145800v5


Ortholog ID: 2507
Species ath ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol c-NAD-MDH2 c-NAD-MDH3 c-NAD-MDH1 LOC103836575 LOC103839246 LOC103844258 LOC111200414 LOC106432835 LOC106371475 LOC102577998 LOC102615934 LOC100783188 LOC547963 LOC100811402 LOC100248145 LOC100253273 LOC100256452 LOC18102471 LOC7453937 LOC7467536 LOC25484448 LOC11436578 LOC11430390 cMDH LOC101253131 LOC102585937 LOC102577663 LOC107823900 LOC107773752 LOC107763505 LOC4336595 LOC4348905 LOC542598 LOC100280767 LOC123121388 LOC543356 LOC123181082 LOC123431137 LOC8070482 LOC100841049 CHLRE_02g145800v5
Function* Lactate/malate dehydrogenase family protein Lactate/malate dehydrogenase family protein Lactate/malate dehydrogenase family protein malate dehydrogenase 2, cytoplasmic malate dehydrogenase 1, cytoplasmic malate dehydrogenase 1, cytoplasmic malate dehydrogenase 2, cytoplasmic malate dehydrogenase 3, cytoplasmic malate dehydrogenase 3, cytoplasmic malate dehydrogenase malate dehydrogenase, cytoplasmic-like malate dehydrogenase, cytoplasmic cytosolic malate dehydrogenase malate dehydrogenase, cytoplasmic-like malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase malate dehydrogenase malate dehydrogenase, cytoplasmic malate dehydrogenase malate dehydrogenase malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic cytosolic malate dehydrogenase malate dehydrogenase malate dehydrogenase, cytoplasmic-like malate dehydrogenase-like protein malate dehydrogenase, cytoplasmic malate dehydrogenase-like malate dehydrogenase-like malate dehydrogenase, cytoplasmic-like malate dehydrogenase, cytoplasmic-like malate dehydrogenase 5 malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic malate dehydrogenase, cytoplasmic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00010 Glycolysis / Gluconeogenesis 9
ath01200 Carbon metabolism 9
ath00710 Carbon fixation by Calvin cycle 5
ath01230 Biosynthesis of amino acids 5
ath00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
ath01200 Carbon metabolism 5
ath00710 Carbon fixation by Calvin cycle 3
ath01230 Biosynthesis of amino acids 3
ath00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 7
bra00190 Oxidative phosphorylation 6
bra00010 Glycolysis / Gluconeogenesis 4
bra00710 Carbon fixation by Calvin cycle 4
bra00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 6
bra04145 Phagosome 6
bra04142 Lysosome 5
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 10
bra00010 Glycolysis / Gluconeogenesis 7
bra01230 Biosynthesis of amino acids 6
bra00710 Carbon fixation by Calvin cycle 5
bra00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 6
bna00270 Cysteine and methionine metabolism 6
bna00566 Sulfoquinovose metabolism 6
bna00620 Pyruvate metabolism 6
bna00630 Glyoxylate and dicarboxylate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 3
bna00480 Glutathione metabolism 3
bna00020 Citrate cycle (TCA cycle) 2
bna00270 Cysteine and methionine metabolism 2
bna00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00053 Ascorbate and aldarate metabolism 3
bna00480 Glutathione metabolism 3
bna00564 Glycerophospholipid metabolism 2
bna00565 Ether lipid metabolism 2
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 5
cit01200 Carbon metabolism 4
cit00010 Glycolysis / Gluconeogenesis 3
cit00710 Carbon fixation by Calvin cycle 3
cit00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 11
gma01200 Carbon metabolism 11
gma01230 Biosynthesis of amino acids 8
gma00010 Glycolysis / Gluconeogenesis 8
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 11
gma00710 Carbon fixation by Calvin cycle 10
gma00010 Glycolysis / Gluconeogenesis 8
gma01230 Biosynthesis of amino acids 7
gma00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 8
vvi00710 Carbon fixation by Calvin cycle 6
vvi01230 Biosynthesis of amino acids 6
vvi00020 Citrate cycle (TCA cycle) 4
vvi00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 8
vvi00710 Carbon fixation by Calvin cycle 6
vvi01230 Biosynthesis of amino acids 6
vvi00010 Glycolysis / Gluconeogenesis 5
vvi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 4
vvi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo01250 Biosynthesis of nucleotide sugars 2
ppo00270 Cysteine and methionine metabolism 2
ppo01230 Biosynthesis of amino acids 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 10
ppo01200 Carbon metabolism 4
ppo00020 Citrate cycle (TCA cycle) 3
ppo00710 Carbon fixation by Calvin cycle 3
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 12
mtr01230 Biosynthesis of amino acids 10
mtr00710 Carbon fixation by Calvin cycle 10
mtr00010 Glycolysis / Gluconeogenesis 7
mtr00220 Arginine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 12
mtr00710 Carbon fixation by Calvin cycle 10
mtr01230 Biosynthesis of amino acids 10
mtr00010 Glycolysis / Gluconeogenesis 9
mtr00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 8
sly00020 Citrate cycle (TCA cycle) 4
sly00620 Pyruvate metabolism 4
sly01200 Carbon metabolism 4
sly04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 10
sot01230 Biosynthesis of amino acids 7
sot00710 Carbon fixation by Calvin cycle 6
sot00620 Pyruvate metabolism 5
sot00010 Glycolysis / Gluconeogenesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta00010 Glycolysis / Gluconeogenesis 2
nta00020 Citrate cycle (TCA cycle) 2
nta00270 Cysteine and methionine metabolism 2
nta00566 Sulfoquinovose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 10
nta01230 Biosynthesis of amino acids 9
nta00710 Carbon fixation by Calvin cycle 8
nta00010 Glycolysis / Gluconeogenesis 6
nta00620 Pyruvate metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 10
nta01200 Carbon metabolism 8
nta00710 Carbon fixation by Calvin cycle 6
nta00620 Pyruvate metabolism 6
nta00010 Glycolysis / Gluconeogenesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00564 Glycerophospholipid metabolism 2
osa00565 Ether lipid metabolism 2
osa04144 Endocytosis 2
osa00500 Starch and sucrose metabolism 2
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 12
osa00010 Glycolysis / Gluconeogenesis 11
osa01230 Biosynthesis of amino acids 10
osa00710 Carbon fixation by Calvin cycle 8
osa00030 Pentose phosphate pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 11
zma01230 Biosynthesis of amino acids 8
zma00710 Carbon fixation by Calvin cycle 8
zma00010 Glycolysis / Gluconeogenesis 7
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 4
zma00270 Cysteine and methionine metabolism 3
zma00710 Carbon fixation by Calvin cycle 3
zma00190 Oxidative phosphorylation 2
zma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 6
tae00010 Glycolysis / Gluconeogenesis 4
tae01200 Carbon metabolism 4
tae01230 Biosynthesis of amino acids 4
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae00100 Steroid biosynthesis 4
tae01200 Carbon metabolism 4
tae00270 Cysteine and methionine metabolism 4
tae00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 4
tae01200 Carbon metabolism 4
tae00270 Cysteine and methionine metabolism 4
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 6
hvu01230 Biosynthesis of amino acids 6
hvu00190 Oxidative phosphorylation 6
hvu00010 Glycolysis / Gluconeogenesis 5
hvu00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 11
sbi00010 Glycolysis / Gluconeogenesis 8
sbi01230 Biosynthesis of amino acids 8
sbi00710 Carbon fixation by Calvin cycle 7
sbi00020 Citrate cycle (TCA cycle) 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 7
bdi00020 Citrate cycle (TCA cycle) 6
bdi00190 Oxidative phosphorylation 5
bdi00620 Pyruvate metabolism 4
bdi00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01200 Carbon metabolism 9
cre00630 Glyoxylate and dicarboxylate metabolism 6
cre00020 Citrate cycle (TCA cycle) 6
cre00620 Pyruvate metabolism 4
cre00010 Glycolysis / Gluconeogenesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834351 835773 839527 103836575 103839246 103844258 111200414 106432835 106371475 102577998 102615934 100783188 547963 100811402 100248145 100253273 100256452 18102471 7453937 7467536 25484448 11436578 11430390 778330 101253131 102585937 102577663 107823900 107773752 107763505 4336595 4348905 542598 100280767 123121388 543356 123181082 123431137 8070482 100841049 5720512
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