Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107938944   F-box/LRR-repeat protein 3 
 ath-u.5   AT5G01720   RNI-like superfamily protein 
 gma-u.5   100812083   F-box/LRR-repeat protein 3 
 gma-u.5   100803617   F-box/LRR-repeat protein 3 
 gma-u.5   100791500   F-box/LRR-repeat protein 3 
 vvi-u.5   100246775   F-box/LRR-repeat protein 3 
 vvi-u.5   100258428   F-box/LRR-repeat protein 3 
 ppo-u.5   7487347   F-box/LRR-repeat protein 3 
 ppo-u.5   7488750   F-box/LRR-repeat protein 3 
 mtr-u.5   25491418   F-box/LRR-repeat protein 3 
 sly-u.5   101243752   F-box/LRR-repeat protein 3 
 osa-u.5   4351279   F-box/LRR-repeat protein 3 
 osa-u.5   9270453   F-box/LRR-repeat protein 3 
 zma-u.5   103647160   F-box/LRR-repeat protein 3 

close


Top 50 coexpressed genes to 107938944 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107938944 (ghi-r.1 coexpression data)

CoexMap"107938944"


ghiLOC107938944 | Entrez gene ID : 107938944    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 2 2 1 1 2 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (153 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (155 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016727702.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_016727702.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016727702.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107938944
ath-u.5
for
AT5G01720
gma-u.5
for
100812083
gma-u.5
for
100803617
gma-u.5
for
100791500
vvi-u.5
for
100246775
vvi-u.5
for
100258428
ppo-u.5
for
7487347
ppo-u.5
for
7488750
mtr-u.5
for
25491418
sly-u.5
for
101243752
osa-u.5
for
4351279
osa-u.5
for
9270453
zma-u.5
for
103647160


Ortholog ID: 6352
Species ghi ghi ath bra bna bna cit cit gma gma vvi vvi ppo mtr sly sot nta nta osa osa zma tae tae hvu sbi sbi bdi
Symbol LOC107927118 LOC107939668 AT5G01720 LOC103855400 LOC106427109 LOC106433790 LOC102614204 LOC102609404 LOC100803617 LOC100812083 LOC100258428 LOC100246775 LOC7487347 LOC25491418 LOC101243752 LOC102589968 LOC107787065 LOC107802971 LOC4351279 LOC9270453 LOC103647160 LOC123120481 LOC123111387 LOC123395327 LOC8067589 LOC8055508 LOC100821244
Function* F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 RNI-like superfamily protein F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3-like F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3 F-box/LRR-repeat protein 3
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 2
ghi00350 Tyrosine metabolism 2
ghi00360 Phenylalanine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04626 Plant-pathogen interaction 3
vvi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00020 Citrate cycle (TCA cycle) 2
sot01200 Carbon metabolism 2
sot01210 2-Oxocarboxylic acid metabolism 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927118 107939668 831688 103855400 106427109 106433790 102614204 102609404 100803617 100812083 100258428 100246775 7487347 25491418 101243752 102589968 107787065 107802971 4351279 9270453 103647160 123120481 123111387 123395327 8067589 8055508 100821244
The preparation time of this page was 1.0 [sec].