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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939302   anthranilate phosphoribosyltransferase, chloroplastic 
 ath-u.5   TRP1   tryptophan biosynthesis 1 
 gma-u.5   100794615   anthranilate phosphoribosyltransferase, chloroplastic 
 vvi-u.5   100255305   anthranilate phosphoribosyltransferase, chloroplastic 
 vvi-u.5   100252445   anthranilate phosphoribosyltransferase, chloroplastic 
 ppo-u.5   7456898   anthranilate phosphoribosyltransferase, chloroplastic 
 mtr-u.5   11430186   anthranilate phosphoribosyltransferase, chloroplastic 
 sly-u.5   101257271   anthranilate phosphoribosyltransferase, chloroplastic 
 sly-u.5   101249247   anthranilate phosphoribosyltransferase, chloroplastic-like 
 osa-u.5   4331468   anthranilate phosphoribosyltransferase, chloroplastic 
 zma-u.5   100192060   uncharacterized LOC100192060 

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Top 50 coexpressed genes to 107939302 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939302 (ghi-r.1 coexpression data)

CoexMap"107939302"


ghiLOC107939302 | Entrez gene ID : 107939302    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 1 2 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (103 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0000162 [list] [network] L-tryptophan biosynthetic process  (27 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2580 genes)  IEA  
GO MF
GO:0004048 [list] [network] anthranilate phosphoribosyltransferase activity  (2 genes)  IEA  
Protein XP_016728110.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_016728110.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016728110.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939302

.
ath-u.5
for
TRP1

.
gma-u.5
for
100794615

.
vvi-u.5
for
100255305

.
vvi-u.5
for
100252445

.
ppo-u.5
for
7456898

.
mtr-u.5
for
11430186

.
sly-u.5
for
101257271

.
sly-u.5
for
101249247

.
osa-u.5
for
4331468

.
zma-u.5
for
100192060

.


Ortholog ID: 6652
Species ath gma sly sly osa zma bra bra vvi vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol TRP1 LOC100794615 LOC101257271 LOC101249247 LOC4331468 LOC100192060 LOC103851145 LOC103845884 LOC100252445 LOC100255305 LOC7456898 LOC11430186 LOC123093544 LOC123098815 LOC123449819 LOC107939804 LOC107939302 LOC106432520 LOC106426145 CHLRE_10g429150v5 LOC8085712 LOC102591549 LOC102606053 LOC102626494 LOC100834744 LOC107827513 LOC107769932
Function* tryptophan biosynthesis 1 anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic-like anthranilate phosphoribosyltransferase, chloroplastic uncharacterized LOC100192060 anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic uncharacterized protein anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic-like anthranilate phosphoribosyltransferase, chloroplastic-like anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic anthranilate phosphoribosyltransferase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
ath00260 Glycine, serine and threonine metabolism 4
ath01210 2-Oxocarboxylic acid metabolism 4
ath00380 Tryptophan metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 3
sly00010 Glycolysis / Gluconeogenesis 2
sly00051 Fructose and mannose metabolism 2
sly00052 Galactose metabolism 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly02010 ABC transporters 3
sly00062 Fatty acid elongation 2
sly04626 Plant-pathogen interaction 2
sly04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
osa01230 Biosynthesis of amino acids 9
osa00260 Glycine, serine and threonine metabolism 2
osa00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 10
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
zma00670 One carbon pool by folate 3
zma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra00920 Sulfur metabolism 3
bra00480 Glutathione metabolism 3
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bra00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 6
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bra00920 Sulfur metabolism 3
bra00480 Glutathione metabolism 2
bra01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi01250 Biosynthesis of nucleotide sugars 3
vvi00053 Ascorbate and aldarate metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 3
vvi00860 Porphyrin metabolism 3
vvi01240 Biosynthesis of cofactors 3
vvi00010 Glycolysis / Gluconeogenesis 2
vvi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
ppo03010 Ribosome 2
ppo00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 4
mtr00561 Glycerolipid metabolism 3
mtr00260 Glycine, serine and threonine metabolism 2
mtr00410 beta-Alanine metabolism 2
mtr01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
tae01230 Biosynthesis of amino acids 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
tae01230 Biosynthesis of amino acids 10
tae00260 Glycine, serine and threonine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 9
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
hvu00220 Arginine biosynthesis 3
hvu00250 Alanine, aspartate and glutamate metabolism 3
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 6
cre01240 Biosynthesis of cofactors 2
cre00970 Aminoacyl-tRNA biosynthesis 2
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi01230 Biosynthesis of amino acids 9
sbi00260 Glycine, serine and threonine metabolism 2
sbi00350 Tyrosine metabolism 2
sbi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 4
sot04016 MAPK signaling pathway - plant 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00062 Fatty acid elongation 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 8
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
bdi00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00061 Fatty acid biosynthesis 2
nta00071 Fatty acid degradation 2
nta01212 Fatty acid metabolism 2
nta04146 Peroxisome 2
nta00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831666 100794615 101257271 101249247 4331468 100192060 103851145 103845884 100252445 100255305 7456898 11430186 123093544 123098815 123449819 107939804 107939302 106432520 106426145 5728119 8085712 102591549 102606053 102626494 100834744 107827513 107769932
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