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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107939460   protein CHROMATIN REMODELING 5 
 ghi-r.1   107945145   protein CHROMATIN REMODELING 5 
 ghi-r.1   107891437   protein CHROMATIN REMODELING 5 
 ghi-r.1   107889299   protein CHROMATIN REMODELING 5 
 ath-u.5   CHR5   chromatin remodeling 5 
 bra-r.6   103837640   protein CHROMATIN REMODELING 5 
 bna-r.1   106366361   protein CHROMATIN REMODELING 5 
 bna-r.1   106410321   protein CHROMATIN REMODELING 5 
 cit-r.1   102610451   protein CHROMATIN REMODELING 5 
 gma-u.5   100808039   protein CHROMATIN REMODELING 5 
 gma-u.5   100792398   protein CHROMATIN REMODELING 5 
 vvi-u.5   100261898   protein CHROMATIN REMODELING 5 
 ppo-u.5   7467397   protein CHROMATIN REMODELING 5 
 ppo-u.5   7461648   protein CHROMATIN REMODELING 5 
 mtr-u.5   11425259   protein CHROMATIN REMODELING 5 
 mtr-u.5   11435417   protein CHROMATIN REMODELING 5 
 sly-u.5   101252967   protein CHROMATIN REMODELING 5 
 sot-r.1   102593358   protein CHROMATIN REMODELING 5 
 nta-r.1   107795803   protein CHROMATIN REMODELING 5 
 nta-r.1   107761494   protein CHROMATIN REMODELING 5-like 
 osa-u.5   4344175   protein CHROMATIN REMODELING 5 
 zma-u.5   103647912   protein CHROMATIN REMODELING 5 
 zma-u.5   103633530   protein CHROMATIN REMODELING 5 
 tae-r.2   123051727   protein CHROMATIN REMODELING 5 
 hvu-r.1   123424887   protein CHROMATIN REMODELING 5 
 sbi-r.1   8072256   protein CHROMATIN REMODELING 5 
 bdi-r.1   100826108   protein CHROMATIN REMODELING 5 
 cre-r.1   CHLRE_03g179300v5   uncharacterized protein 

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Top 50 coexpressed genes to 107939460 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107939460 (ghi-r.1 coexpression data)

CoexMap"107939460"


ghiLOC107939460 | Entrez gene ID : 107939460    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 2 2 1 1 2 1 2 1 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034728 [list] [network] nucleosome organization  (113 genes)  IEA  
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0000785 [list] [network] chromatin  (561 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0140658 [list] [network] ATP-dependent chromatin remodeler activity  (93 genes)  IEA  
GO:0042393 [list] [network] histone binding  (158 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (366 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016728283.1 [sequence] [blastp]
XP_016728284.1 [sequence] [blastp]
XP_016728285.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_016728283.1)
nucl 6,  cyto 3  (predict for XP_016728284.1)
nucl 6,  cyto 3  (predict for XP_016728285.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016728283.1)
other 8  (predict for XP_016728284.1)
other 8  (predict for XP_016728285.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107939460
ghi-r.1
for
107945145
ghi-r.1
for
107891437
ghi-r.1
for
107889299
ath-u.5
for
CHR5
bra-r.6
for
103837640
bna-r.1
for
106366361
bna-r.1
for
106410321
cit-r.1
for
102610451
gma-u.5
for
100808039
gma-u.5
for
100792398
vvi-u.5
for
100261898
ppo-u.5
for
7467397
ppo-u.5
for
7461648
mtr-u.5
for
11425259
mtr-u.5
for
11435417
sly-u.5
for
101252967
sot-r.1
for
102593358
nta-r.1
for
107795803
nta-r.1
for
107761494
osa-u.5
for
4344175
zma-u.5
for
103647912
zma-u.5
for
103633530
tae-r.2
for
123051727
hvu-r.1
for
123424887
sbi-r.1
for
8072256
bdi-r.1
for
100826108
cre-r.1
for
CHLRE_03g179300v5


Ortholog ID: 8383
Species ghi ghi ghi ath bra bna bna cit gma gma vvi ppo ppo mtr mtr sly sot nta nta osa zma zma tae hvu sbi bdi cre
Symbol LOC107939460 LOC107945145 LOC107889299 CHR5 LOC103837640 LOC106366361 LOC106410321 LOC102610451 LOC100808039 LOC100792398 LOC100261898 LOC7467397 LOC7461648 LOC11425259 LOC11435417 LOC101252967 LOC102593358 LOC107795803 LOC107761494 LOC4344175 LOC103647912 LOC103633530 LOC123051727 LOC123424887 LOC8072256 LOC100826108 CHLRE_03g179300v5
Function* protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 chromatin remodeling 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5-like protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 protein CHROMATIN REMODELING 5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00562 Inositol phosphate metabolism 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
tae03015 mRNA surveillance pathway 2
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107939460 107945145 107889299 815823 103837640 106366361 106410321 102610451 100808039 100792398 100261898 7467397 7461648 11425259 11435417 101252967 102593358 107795803 107761494 4344175 103647912 103633530 123051727 123424887 8072256 100826108 5728805
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