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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107941558   GATA transcription factor 24 
 ghi-r.1   107921312   GATA transcription factor 24 
 ghi-r.1   107916983   GATA transcription factor 24 
 ghi-r.1   107908924   GATA transcription factor 19 
 cit-r.1   102611915   GATA transcription factor 19-like 
 cit-r.1   102611454   GATA transcription factor 24-like 
 gma-u.5   102669848   GATA transcription factor 28 
 gma-u.5   100801328   GATA transcription factor 24 
 gma-u.5   100785549   GATA transcription factor 24 
 vvi-u.5   100243813   GATA transcription factor 19 
 vvi-u.5   100257426   GATA transcription factor 24 
 ppo-u.5   7467225   GATA transcription factor 24 
 ppo-u.5   7468843   GATA transcription factor 24 
 ppo-u.5   7484606   GATA transcription factor 19 
 mtr-u.5   11432282   GATA transcription factor 19 
 sly-u.5   101247269   GATA transcription factor 19-like 
 sly-u.5   101259837   GATA transcription factor 19-like 
 sot-r.1   102599411   GATA transcription factor 24-like 
 sot-r.1   102586505   GATA transcription factor 24-like 
 nta-r.1   107759649   GATA transcription factor 19 
 nta-r.1   107783346   GATA transcription factor 19 
 nta-r.1   107805501   GATA transcription factor 19-like 

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Top 50 coexpressed genes to 107941558 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107941558 (ghi-r.1 coexpression data)

CoexMap"107941558"


ghiLOC107941558 | Entrez gene ID : 107941558    
Species ghi cit gma vvi ppo mtr sly sot nta bra zma cre sbi ath tae bna osa hvu bdi
Paralog 4 2 3 2 3 1 2 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016730600.1 [sequence] [blastp]
XP_016730601.1 [sequence] [blastp]
XP_016730603.1 [sequence] [blastp]
XP_016730606.1 [sequence] [blastp]
XP_016730607.1 [sequence] [blastp]
XP_040970816.1 [sequence] [blastp]
XP_040970817.1 [sequence] [blastp]
XP_040970818.1 [sequence] [blastp]
XP_040970819.1 [sequence] [blastp]
XP_040970820.1 [sequence] [blastp]
XP_040970821.1 [sequence] [blastp]
XP_040970822.1 [sequence] [blastp]
XP_040970824.1 [sequence] [blastp]
XP_040970825.1 [sequence] [blastp]
XP_040970826.1 [sequence] [blastp]
XP_040970827.1 [sequence] [blastp]
XP_040970828.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_016730600.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_016730601.1)
cyto 4,  chlo 3,  nucl 3  (predict for XP_016730603.1)
nucl 7,  chlo 1,  cyto 1  (predict for XP_016730606.1)
nucl 5,  cyto 4,  chlo 1  (predict for XP_016730607.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_040970816.1)
cyto 4,  chlo 3,  nucl 3  (predict for XP_040970817.1)
cyto 4,  chlo 3,  nucl 3  (predict for XP_040970818.1)
cyto 4,  chlo 3,  nucl 3  (predict for XP_040970819.1)
nucl 7,  chlo 1,  cyto 1  (predict for XP_040970820.1)
nucl 7,  chlo 1,  cyto 1  (predict for XP_040970821.1)
nucl 5,  cyto 4,  chlo 1  (predict for XP_040970822.1)
nucl 6,  chlo 2,  cyto 2  (predict for XP_040970824.1)
nucl 6,  chlo 2,  cyto 2  (predict for XP_040970825.1)
nucl 6,  cyto 4  (predict for XP_040970826.1)
nucl 6,  cyto 4  (predict for XP_040970827.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_040970828.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_016730600.1)
other 6,  mito 4  (predict for XP_016730601.1)
other 6,  mito 4  (predict for XP_016730603.1)
other 6,  mito 4  (predict for XP_016730606.1)
other 6,  mito 4  (predict for XP_016730607.1)
other 6,  mito 4  (predict for XP_040970816.1)
other 6,  mito 4  (predict for XP_040970817.1)
other 6,  mito 4  (predict for XP_040970818.1)
other 6,  mito 4  (predict for XP_040970819.1)
other 6,  mito 4  (predict for XP_040970820.1)
other 6,  mito 4  (predict for XP_040970821.1)
other 6,  mito 4  (predict for XP_040970822.1)
other 6,  mito 4  (predict for XP_040970824.1)
other 6,  mito 4  (predict for XP_040970825.1)
other 6,  mito 4  (predict for XP_040970826.1)
other 6,  mito 4  (predict for XP_040970827.1)
other 6,  mito 4  (predict for XP_040970828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107941558
ghi-r.1
for
107921312
ghi-r.1
for
107916983
ghi-r.1
for
107908924
cit-r.1
for
102611915
cit-r.1
for
102611454
gma-u.5
for
102669848
gma-u.5
for
100801328
gma-u.5
for
100785549
vvi-u.5
for
100243813
vvi-u.5
for
100257426
ppo-u.5
for
7467225
ppo-u.5
for
7468843
ppo-u.5
for
7484606
mtr-u.5
for
11432282
sly-u.5
for
101247269
sly-u.5
for
101259837
sot-r.1
for
102599411
sot-r.1
for
102586505
nta-r.1
for
107759649
nta-r.1
for
107783346
nta-r.1
for
107805501


Ortholog ID: 8823
Species ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr sly sly sot sot nta nta nta
Symbol LOC107921312 LOC107908924 LOC107887003 LOC102611915 LOC102611454 LOC102669848 LOC100801328 LOC100784257 LOC100243813 LOC100257426 LOC7468843 LOC7484606 LOC7486062 LOC11432282 LOC101247269 LOC101259837 LOC102599411 LOC102586505 LOC107759649 LOC107783346 LOC107805501
Function* GATA transcription factor 24 GATA transcription factor 19 GATA transcription factor 19 GATA transcription factor 19-like GATA transcription factor 24-like GATA transcription factor 28 GATA transcription factor 24 GATA transcription factor 24-like GATA transcription factor 19 GATA transcription factor 24 GATA transcription factor 24 GATA transcription factor 19 GATA transcription factor 19 GATA transcription factor 19 GATA transcription factor 19-like GATA transcription factor 19-like GATA transcription factor 24-like GATA transcription factor 24-like GATA transcription factor 19 GATA transcription factor 19 GATA transcription factor 19-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 5
ghi00051 Fructose and mannose metabolism 5
ghi00500 Starch and sucrose metabolism 4
ghi00330 Arginine and proline metabolism 2
ghi00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
ghi03010 Ribosome 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 3
nta03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107921312 107908924 107887003 102611915 102611454 102669848 100801328 100784257 100243813 100257426 7468843 7484606 7486062 11432282 101247269 101259837 102599411 102586505 107759649 107783346 107805501
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