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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107941615   histone deacetylase 8 
 ath-u.5   HDA08   histone deacetylase 8 
 gma-u.5   HDA14   histone deacetylase 
 vvi-u.5   100255252   histone deacetylase 8 
 ppo-u.5   7491105   histone deacetylase 8 
 mtr-u.5   11412418   histone deacetylase 8 
 sly-u.5   101257380   histone deacetylase 8 
 osa-u.5   4338920   histone deacetylase 8 
 osa-u.5   4338921   histone deacetylase 8 
 zma-u.5   109461487   uncharacterized LOC109461487 
 zma-u.5   100274588   uncharacterized LOC100274588 

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Top 50 coexpressed genes to 107941615 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107941615 (ghi-r.1 coexpression data)

CoexMap"107941615"


ghiLOC107941615 | Entrez gene ID : 107941615    
Species ghi ath gma vvi ppo mtr sly osa zma hvu bna cit bra sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004407 [list] [network] histone deacetylase activity  (19 genes)  IEA  
Protein XP_016730703.1 [sequence] [blastp]
XP_016730764.1 [sequence] [blastp]
XP_016730836.1 [sequence] [blastp]
XP_016730901.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_016730703.1)
cyto 6,  chlo 1,  nucl 1,  mito 1,  pero 1,  cysk 1,  chlo_mito 1,  cysk_nucl 1  (predict for XP_016730764.1)
cyto 6,  pero 2,  nucl 1  (predict for XP_016730836.1)
cyto 7,  chlo 1,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_016730901.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016730703.1)
other 8  (predict for XP_016730764.1)
other 8  (predict for XP_016730836.1)
other 8  (predict for XP_016730901.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107941615
ath-u.5
for
HDA08
gma-u.5
for
HDA14
vvi-u.5
for
100255252
ppo-u.5
for
7491105
mtr-u.5
for
11412418
sly-u.5
for
101257380
osa-u.5
for
4338920
osa-u.5
for
4338921
zma-u.5
for
109461487
zma-u.5
for
100274588


Ortholog ID: 11034
Species ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae hvu sbi bdi
Symbol LOC107941615 HDA08 LOC103843397 LOC106377033 LOC106419804 LOC102610084 HDA14 LOC100255252 LOC7491105 LOC11412418 LOC101257380 LOC102605249 LOC107807580 LOC107801503 LOC4338920 LOC4338921 LOC100274588 LOC109461487 LOC123182168 LOC123057774 LOC123446287 LOC8058527 LOC100832243
Function* histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8-like histone deacetylase 8 histone deacetylase histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8-like histone deacetylase 8 histone deacetylase 8 uncharacterized LOC100274588 uncharacterized LOC109461487 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8 histone deacetylase 8
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
mtr03083 Polycomb repressive complex 2
mtr03018 RNA degradation 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 8
nta00510 N-Glycan biosynthesis 4
nta00513 Various types of N-glycan biosynthesis 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 4
osa00640 Propanoate metabolism 2
osa00785 Lipoic acid metabolism 2
osa01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 5
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 4
tae00230 Purine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 6
hvu00280 Valine, leucine and isoleucine degradation 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107941615 837366 103843397 106377033 106419804 102610084 100820007 100255252 7491105 11412418 101257380 102605249 107807580 107801503 4338920 4338921 100274588 109461487 123182168 123057774 123446287 8058527 100832243
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