Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107942000   octanoyltransferase LIP2p, chloroplastic 
 ghi-r.1   107905385   octanoyltransferase LIP2p, chloroplastic 
 ath-u.5   AT4G31050   Biotin/lipoate A/B protein ligase family 
 bra-r.6   103852129   octanoyltransferase LIP2p, chloroplastic 
 bra-r.6   103834637   octanoyltransferase LIP2p, chloroplastic 
 cit-r.1   102610869   octanoyltransferase LIP2p, chloroplastic 
 gma-u.5   100802770   octanoyltransferase LIP2p, chloroplastic 
 gma-u.5   100797208   octanoyltransferase LIP2p, chloroplastic 
 vvi-u.5   100251103   biotin/lipoate A/B protein ligase family-like 
 ppo-u.5   112326506   octanoyltransferase LIP2p, chloroplastic 
 mtr-u.5   25490168   octanoyltransferase LIP2p, chloroplastic 
 sly-u.5   101244660   octanoyltransferase LIP2p, chloroplastic 
 sot-r.1   102589650   plastidial lipoyltransferase 2 
 nta-r.1   107822010   octanoyltransferase LIP2p, chloroplastic 
 nta-r.1   107790027   octanoyltransferase LIP2p, chloroplastic 
 osa-u.5   4352692   octanoyltransferase LIP2p, chloroplastic 
 zma-u.5   100272694   uncharacterized LOC100272694 
 hvu-r.1   123396497   octanoyltransferase LIP2p2, chloroplastic-like 
 sbi-r.1   8069736   plastidial lipoyltransferase 2 
 bdi-r.1   100840125   plastidial lipoyltransferase 2 
 cre-r.1   CHLRE_16g675250v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107942000 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107942000 (ghi-r.1 coexpression data)

CoexMap"107942000"


ghiLOC107942000 | Entrez gene ID : 107942000    
Species ghi ath bra cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae bna
Paralog 2 1 2 1 2 1 1 1 1 1 2 1 1 1 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00785 [list] [network] Lipoic acid metabolism (79 genes)
ghi01240 [list] [network] Biosynthesis of cofactors (583 genes)
GO BP
GO:0009249 [list] [network] protein lipoylation  (10 genes)  IEA  
GO:0008033 [list] [network] tRNA processing  (215 genes)  IEA  
GO:0006364 [list] [network] rRNA processing  (477 genes)  IEA  
GO CC
GO:0005655 [list] [network] nucleolar ribonuclease P complex  (6 genes)  IEA  
GO:0000172 [list] [network] ribonuclease MRP complex  (10 genes)  IEA  
GO MF
GO:0033819 [list] [network] lipoyl(octanoyl) transferase activity  (4 genes)  IEA  
Protein XP_016731127.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  E.R. 2,  chlo_mito 2,  cyto 1,  extr 1  (predict for XP_016731127.1)
Subcellular
localization
TargetP
other 6  (predict for XP_016731127.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107942000
ghi-r.1
for
107905385
ath-u.5
for
AT4G31050
bra-r.6
for
103852129
bra-r.6
for
103834637
cit-r.1
for
102610869
gma-u.5
for
100802770
gma-u.5
for
100797208
vvi-u.5
for
100251103
ppo-u.5
for
112326506
mtr-u.5
for
25490168
sly-u.5
for
101244660
sot-r.1
for
102589650
nta-r.1
for
107822010
nta-r.1
for
107790027
osa-u.5
for
4352692
zma-u.5
for
100272694
hvu-r.1
for
123396497
sbi-r.1
for
8069736
bdi-r.1
for
100840125
cre-r.1
for
CHLRE_16g675250v5


Ortholog ID: 7685
Species ghi ghi ath bra bra cit gma gma vvi ppo mtr sly sot nta nta osa zma tae hvu sbi bdi cre
Symbol LOC107942000 LOC107905385 AT4G31050 LOC103852129 LOC103834637 LOC102610869 LOC100802770 LOC100797208 LOC100251103 LOC112326506 LOC25490168 LOC101244660 LOC102589650 LOC107822010 LOC107790027 LOC4352692 LOC100272694 LOC123069013 LOC123396497 LOC8069736 LOC100840125 CHLRE_16g675250v5
Function* octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic Biotin/lipoate A/B protein ligase family octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic biotin/lipoate A/B protein ligase family-like octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic plastidial lipoyltransferase 2 octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic octanoyltransferase LIP2p, chloroplastic uncharacterized LOC100272694 octanoyltransferase LIP2p2, chloroplastic octanoyltransferase LIP2p2, chloroplastic-like plastidial lipoyltransferase 2 plastidial lipoyltransferase 2 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00630 Glyoxylate and dicarboxylate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00450 Selenocompound metabolism 2
ghi03010 Ribosome 2
ghi00785 Lipoic acid metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 5
ppo00785 Lipoic acid metabolism 4
ppo01200 Carbon metabolism 3
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00785 Lipoic acid metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00600 Sphingolipid metabolism 3
nta04382 Cornified envelope formation 3
nta03015 mRNA surveillance pathway 2
nta00785 Lipoic acid metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00061 Fatty acid biosynthesis 3
zma01212 Fatty acid metabolism 3
zma01240 Biosynthesis of cofactors 2
zma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00630 Glyoxylate and dicarboxylate metabolism 4
tae00860 Porphyrin metabolism 3
tae00220 Arginine biosynthesis 3
tae00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942000 107905385 829232 103852129 103834637 102610869 100802770 100797208 100251103 112326506 25490168 101244660 102589650 107822010 107790027 4352692 100272694 123069013 123396497 8069736 100840125 5721459
The preparation time of this page was 0.2 [sec].