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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1  107942132  pentatricopeptide repeat-containing protein At5g01110 
 ghi-r.1  107934137  pentatricopeptide repeat-containing protein At5g01110 
 cit-r.1  102617004  pentatricopeptide repeat-containing protein At1g63330-like 
 gma-u.5  100775884  pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5  100264976  pentatricopeptide repeat-containing protein At5g39710 
 ppo-u.5  18105108  pentatricopeptide repeat-containing protein At1g09900 
 mtr-u.5  25499013  pentatricopeptide repeat-containing protein At1g09900 
 sly-u.5  101245807  pentatricopeptide repeat-containing protein At1g63330-like 
 sot-r.1  102589246  pentatricopeptide repeat-containing protein At1g12620-like 
 nta-r.1  107808237  uncharacterized LOC107808237 
 nta-r.1  107821987  uncharacterized LOC107821987 

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Top 50 coexpressed genes to 107942132 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107942132 (ghi-r.1 coexpression data)

CoexMap"107942132"


ghiLOC107942132 | Entrez gene ID : 107942132
Species ghi cit gma vvi ppo mtr sly sot nta bdi osa tae bna zma cre sbi bra ath hvu
Paralog 2 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016731269.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1  (predict for XP_016731269.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016731269.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ghi-r.1
for
107942132


ghi-r.1
for
107934137


cit-r.1
for
102617004


gma-u.5
for
100775884


vvi-u.5
for
100264976


ppo-u.5
for
18105108


mtr-u.5
for
25499013


sly-u.5
for
101245807


sot-r.1
for
102589246


nta-r.1
for
107808237


nta-r.1
for
107821987



Ortholog ID: 14558
Species ghi ghi cit gma vvi ppo mtr sly sot nta nta
Symbol LOC107942132 LOC107934137 LOC102617004 LOC100775884 LOC100264976 LOC18105108 LOC25499013 LOC101245807 LOC102589246 LOC107808237 LOC107821987
Function* pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At5g01110 pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g39710 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g63330-like pentatricopeptide repeat-containing protein At1g12620-like uncharacterized LOC107808237 uncharacterized LOC107821987
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942132 107934137 102617004 100775884 100264976 18105108 25499013 101245807 102589246 107808237 107821987
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