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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107942623   60S ribosomal protein L26-1 
 ath-u.5   AT3G49910   Translation protein SH3-like family protein 
 ath-u.5   AT5G67510   Translation protein SH3-like family protein 
 gma-u.5   100788996   putative 60S ribosomal protein L26 
 gma-u.5   100775705   60S ribosomal protein L26-1 
 gma-u.5   100779956   60S ribosomal protein L26-1 
 vvi-u.5   100242242   large ribosomal subunit protein uL24z 
 vvi-u.5   100267018   60S ribosomal protein L26-1-like 
 ppo-u.5   7486328   60S ribosomal protein L26-1 
 ppo-u.5   18101102   60S ribosomal protein L26-1 
 ppo-u.5   7456938   60S ribosomal protein L26-1 
 mtr-u.5   11425151   60S ribosomal protein L26-2 
 mtr-u.5   11425352   60S ribosomal protein L26-1 
 mtr-u.5   11436692   60S ribosomal protein L26-1 
 sly-u.5   101246988   large ribosomal subunit protein uL24z 
 sly-u.5   101261182   large ribosomal subunit protein uL24z 
 sly-u.5   101267290   large ribosomal subunit protein uL24z 
 osa-u.5   4351513   large ribosomal subunit protein uL24z 
 osa-u.5   4349791   large ribosomal subunit protein uL24z 
 osa-u.5   4325478   large ribosomal subunit protein uL24z 
 zma-u.5   542610   60S ribosomal protein L26-1 
 zma-u.5   100285268   60S ribosomal protein L26-1 

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Top 50 coexpressed genes to 107942623 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107942623 (ghi-r.1 coexpression data)

CoexMap"107942623"


ghiLOC107942623 | Entrez gene ID : 107942623    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 2 3 2 3 3 3 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0002181 [list] [network] cytoplasmic translation  (214 genes)  IEA  
GO:0042273 [list] [network] ribosomal large subunit biogenesis  (235 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016731813.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 3,  cyto_nucl 3  (predict for XP_016731813.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for XP_016731813.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107942623

.
ath-u.5
for
AT3G49910

.
ath-u.5
for
AT5G67510

.
gma-u.5
for
100788996

.
gma-u.5
for
100775705

.
gma-u.5
for
100779956

.
vvi-u.5
for
100242242

.
vvi-u.5
for
100267018

.
ppo-u.5
for
7486328

.
ppo-u.5
for
18101102

.
ppo-u.5
for
7456938

.
mtr-u.5
for
11425151

.
mtr-u.5
for
11425352

.
mtr-u.5
for
11436692

.
sly-u.5
for
101246988

.
sly-u.5
for
101261182

.
sly-u.5
for
101267290

.
osa-u.5
for
4351513

.
osa-u.5
for
4349791

.
osa-u.5
for
4325478

.
zma-u.5
for
542610

.
zma-u.5
for
100285268

.


Ortholog ID: 2654
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol AT5G67510 AT3G49910 LOC100788996 LOC100775705 LOC101246988 LOC101267290 LOC4351513 LOC4349791 LOC100285268 LOC542610 LOC103827745 LOC103840913 LOC100267018 LOC100242242 LOC18101102 LOC7486328 LOC11425352 LOC11425151 LOC123077703 LOC123060594 LOC123443110 LOC107924753 LOC106451222 LOC106390881 CHLRE_01g040000v5 LOC8073332 LOC102588872 LOC102596561 LOC102621144 LOC100826639 LOC107831809 LOC107826309
Function* Translation protein SH3-like family protein Translation protein SH3-like family protein putative 60S ribosomal protein L26 60S ribosomal protein L26-1 large ribosomal subunit protein uL24z large ribosomal subunit protein uL24z large ribosomal subunit protein uL24z large ribosomal subunit protein uL24z 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1-like large ribosomal subunit protein uL24z 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-2 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1-like 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1 ribosomal protein L26 60S ribosomal protein L26-1 60S ribosomal protein L26-1 60S ribosomal protein L26-1-like 60S ribosomal protein L26-1 60S ribosomal protein L26-1 large ribosomal subunit protein uL24z large ribosomal subunit protein uL24z-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 20
gma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 16
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
osa04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 15
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 21
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 17
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
tae00750 Vitamin B6 metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836887 824153 100788996 100775705 101246988 101267290 4351513 4349791 100285268 542610 103827745 103840913 100267018 100242242 18101102 7486328 11425352 11425151 123077703 123060594 123443110 107924753 106451222 106390881 5715546 8073332 102588872 102596561 102621144 100826639 107831809 107826309
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