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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107895000   E3 ubiquitin-protein ligase SIRP1 
 ghi-r.1   107895033   E3 ubiquitin-protein ligase SIRP1 
 ath-u.5   AT3G13430   RING/U-box superfamily protein 
 ath-u.5   AT4G26400   RING/U-box superfamily protein 
 ath-u.5   ATCRT1   RING/U-box superfamily protein 
 bra-r.6   103868391   E3 ubiquitin-protein ligase SIRP1 
 bra-r.6   103866098   E3 ubiquitin-protein ligase SIRP1 
 bra-r.6   103861624   E3 ubiquitin-protein ligase SIRP1 
 bna-r.1   125577226   E3 ubiquitin-protein ligase SIRP1-like 
 bna-r.1   106387434   E3 ubiquitin-protein ligase SIRP1-like 
 cit-r.1   102627992   E3 ubiquitin-protein ligase SIRP1 
 gma-u.5   100784876   E3 ubiquitin-protein ligase RING1 
 vvi-u.5   100250148   E3 ubiquitin-protein ligase SIRP1 
 ppo-u.5   7483225   E3 ubiquitin-protein ligase SIRP1 
 ppo-u.5   7489682   E3 ubiquitin-protein ligase SIRP1 
 ppo-u.5   7469869   E3 ubiquitin-protein ligase SIRP1 
 mtr-u.5   11433228   E3 ubiquitin-protein ligase SIRP1 
 sly-u.5   101268503   E3 ubiquitin-protein ligase SIRP1 
 sot-r.1   102578980   E3 ubiquitin-protein ligase RING1 
 nta-r.1   107811088   E3 ubiquitin-protein ligase SIRP1-like 
 nta-r.1   107761015   E3 ubiquitin-protein ligase SIRP1 
 osa-u.5   4339152   E3 ubiquitin-protein ligase SIRP1-like 
 osa-u.5   4334547   E3 ubiquitin-protein ligase SIRP1-like 
 zma-u.5   100282229   uncharacterized LOC100282229 
 zma-u.5   100272564   putative RING zinc finger domain superfamily protein 
 zma-u.5   100191157   RING/U-box superfamily protein 
 tae-r.2   123060432   E3 ubiquitin-protein ligase SIRP1 
 tae-r.2   123105603   E3 ubiquitin-protein ligase SIRP1 
 tae-r.2   123113919   E3 ubiquitin-protein ligase SIRP1 
 hvu-r.1   123444355   E3 ubiquitin-protein ligase SIRP1-like 
 hvu-r.1   123452949   E3 ubiquitin-protein ligase SIRP1-like 
 sbi-r.1   110430822   E3 ubiquitin-protein ligase RZF1-like 
 sbi-r.1   8064158   E3 ubiquitin-protein ligase RING1-like 
 bdi-r.1   100832937   E3 ubiquitin-protein ligase SIRP1 
 bdi-r.1   100831529   E3 ubiquitin-protein ligase SIRP1 

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Top 50 coexpressed genes to 107895000 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107895000 (ghi-r.1 coexpression data)

CoexMap"107942732"


ghiLOC107942732 | Entrez gene ID : 107942732    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 3 2 1 1 1 3 1 1 1 2 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
Protein XP_016731940.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016731940.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016731940.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107895000
ghi-r.1
for
107895033
ath-u.5
for
AT3G13430
ath-u.5
for
AT4G26400
ath-u.5
for
ATCRT1
bra-r.6
for
103868391
bra-r.6
for
103866098
bra-r.6
for
103861624
bna-r.1
for
125577226
bna-r.1
for
106387434
cit-r.1
for
102627992
gma-u.5
for
100784876
vvi-u.5
for
100250148
ppo-u.5
for
7483225
ppo-u.5
for
7489682
ppo-u.5
for
7469869
mtr-u.5
for
11433228
sly-u.5
for
101268503
sot-r.1
for
102578980
nta-r.1
for
107811088
nta-r.1
for
107761015
osa-u.5
for
4339152
osa-u.5
for
4334547
zma-u.5
for
100282229
zma-u.5
for
100272564
zma-u.5
for
100191157
tae-r.2
for
123060432
tae-r.2
for
123105603
tae-r.2
for
123113919
hvu-r.1
for
123444355
hvu-r.1
for
123452949
sbi-r.1
for
110430822
sbi-r.1
for
8064158
bdi-r.1
for
100832937
bdi-r.1
for
100831529


Ortholog ID: 2029
Species ghi ath ath ath bra bra bra bna bna bna cit gma vvi ppo ppo ppo mtr sly sot nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107927087 AT3G13430 AT4G26400 AT1G55530 LOC103861624 LOC103832581 LOC103856934 LOC125577226 LOC106360360 LOC106437662 LOC102627992 LOC100784876 LOC100250148 LOC7483225 LOC7489682 LOC7469869 LOC11433228 LOC101268503 LOC102578980 LOC107811088 LOC107761015 LOC4339152 LOC4334547 LOC100282229 LOC100272564 LOC100191157 LOC123105603 LOC123137404 LOC123182406 LOC123444355 LOC123452949 LOC110430822 LOC8064158 LOC100832937 LOC100831529
Function* E3 ubiquitin-protein ligase SIRP1 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1-like E3 ubiquitin-protein ligase SIRP1-like E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase SIRP1-like E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1-like E3 ubiquitin-protein ligase SIRP1-like uncharacterized LOC100282229 putative RING zinc finger domain superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1-like E3 ubiquitin-protein ligase SIRP1-like E3 ubiquitin-protein ligase RZF1-like E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase SIRP1 E3 ubiquitin-protein ligase SIRP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 6
ath03040 Spliceosome 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 10
bra04626 Plant-pathogen interaction 5
bra03040 Spliceosome 3
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr04144 Endocytosis 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 2
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 4
bdi04142 Lysosome 3
bdi00330 Arginine and proline metabolism 3
bdi01200 Carbon metabolism 3
bdi00071 Fatty acid degradation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107927087 820543 828746 842000 103861624 103832581 103856934 125577226 106360360 106437662 102627992 100784876 100250148 7483225 7489682 7469869 11433228 101268503 102578980 107811088 107761015 4339152 4334547 100282229 100272564 100191157 123105603 123137404 123182406 123444355 123452949 110430822 8064158 100832937 100831529
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