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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107942797   phospholipase A1 PLIP1, chloroplastic 
 ghi-r.1   107948183   phospholipase A1 PLIP1, chloroplastic 
 ghi-r.1   107912330   phospholipase A1 PLIP2, chloroplastic 
 ath-u.5   AT3G61680   alpha/beta-Hydrolases superfamily protein 
 ath-u.5   AT3G62590   alpha/beta-Hydrolases superfamily protein 
 ath-u.5   AT1G02660   alpha/beta-Hydrolases superfamily protein 
 bra-r.6   103862815   phospholipase A1 PLIP1, chloroplastic 
 bra-r.6   103843744   phospholipase A1 PLIP2, chloroplastic 
 bra-r.6   103842065   phospholipase A1 PLIP3, chloroplastic 
 bna-r.1   106451985   phospholipase A1 PLIP3, chloroplastic-like 
 bna-r.1   106398651   phospholipase A1 PLIP2, chloroplastic-like 
 bna-r.1   125577222   phospholipase A1 PLIP2, chloroplastic-like 
 cit-r.1   102614506   phospholipase A1 PLIP1, chloroplastic 
 cit-r.1   102623993   hypothetical protein 
 gma-u.5   100780077   phospholipase A1 PLIP1, chloroplastic 
 gma-u.5   100790575   phospholipase A1 PLIP1, chloroplastic 
 vvi-u.5   100256908   phospholipase A1 PLIP1, chloroplastic 
 vvi-u.5   100267577   phospholipase A1 PLIP2, chloroplastic 
 ppo-u.5   7478864   phospholipase A1 PLIP2, chloroplastic 
 ppo-u.5   7497244   phospholipase A1 PLIP1, chloroplastic 
 mtr-u.5   11414891   phospholipase A1 PLIP2, chloroplastic 
 mtr-u.5   11428748   phospholipase A1 PLIP1, chloroplastic 
 sly-u.5   101245704   phospholipase A1 PLIP1, chloroplastic 
 sly-u.5   101246277   phospholipase A1 PLIP2, chloroplastic 
 sot-r.1   102604741   uncharacterized LOC102604741 
 sot-r.1   102605002   uncharacterized LOC102605002 
 nta-r.1   107760325   phospholipase A1 PLIP1, chloroplastic-like 
 nta-r.1   107766701   phospholipase A1 PLIP2, chloroplastic 
 nta-r.1   107772181   phospholipase A1 PLIP1, chloroplastic 
 osa-u.5   9271679   phospholipase A1 PLIP1, chloroplastic 
 osa-u.5   4327707   phospholipase A1 PLIP3, chloroplastic 
 zma-u.5   100281800   triacylglycerol lipase 
 zma-u.5   100502484   alpha/beta-Hydrolases superfamily protein 
 zma-u.5   100383317   alpha/beta-Hydrolases superfamily protein 
 tae-r.2   123061495   phospholipase A1 PLIP1, chloroplastic 
 tae-r.2   123060957   phospholipase A1 PLIP3, chloroplastic 
 tae-r.2   123069553   phospholipase A1 PLIP2, chloroplastic 
 hvu-r.1   123443894   phospholipase A1 PLIP1, chloroplastic-like 
 hvu-r.1   123443386   phospholipase A1 PLIP2, chloroplastic-like 
 sbi-r.1   8071198   uncharacterized LOC8071198 
 sbi-r.1   8084837   uncharacterized LOC8084837 
 sbi-r.1   8072412   uncharacterized LOC8072412 
 bdi-r.1   100845988   uncharacterized LOC100845988 
 bdi-r.1   100836436   uncharacterized LOC100836436 
 cre-r.1   CHLRE_05g248200v5   uncharacterized protein 

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Top 50 coexpressed genes to 107942797 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107942797 (ghi-r.1 coexpression data)

CoexMap"107942797"


ghiLOC107942797 | Entrez gene ID : 107942797    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 2 2 2 2 2 2 2 3 2 3 3 2 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006629 [list] [network] lipid metabolic process  (1962 genes)  IEA  
GO CC
GO MF
GO:0008970 [list] [network] phospholipase A1 activity  (29 genes)  IEA  
Protein XP_040962650.1 [sequence] [blastp]
XP_040962651.1 [sequence] [blastp]
XP_040962652.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 2,  cyto 1,  cysk_nucl 1  (predict for XP_040962650.1)
chlo 5,  nucl 2,  cyto 1,  cysk_nucl 1  (predict for XP_040962651.1)
chlo 5,  nucl 2,  cyto 1,  cysk_nucl 1  (predict for XP_040962652.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_040962650.1)
chlo 6,  other 4  (predict for XP_040962651.1)
chlo 6,  other 4  (predict for XP_040962652.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107942797
ghi-r.1
for
107948183
ghi-r.1
for
107912330
ath-u.5
for
AT3G61680
ath-u.5
for
AT3G62590
ath-u.5
for
AT1G02660
bra-r.6
for
103862815
bra-r.6
for
103843744
bra-r.6
for
103842065
bna-r.1
for
106451985
bna-r.1
for
106398651
bna-r.1
for
125577222
cit-r.1
for
102614506
cit-r.1
for
102623993
gma-u.5
for
100780077
gma-u.5
for
100790575
vvi-u.5
for
100256908
vvi-u.5
for
100267577
ppo-u.5
for
7478864
ppo-u.5
for
7497244
mtr-u.5
for
11414891
mtr-u.5
for
11428748
sly-u.5
for
101245704
sly-u.5
for
101246277
sot-r.1
for
102604741
sot-r.1
for
102605002
nta-r.1
for
107760325
nta-r.1
for
107766701
nta-r.1
for
107772181
osa-u.5
for
9271679
osa-u.5
for
4327707
zma-u.5
for
100281800
zma-u.5
for
100502484
zma-u.5
for
100383317
tae-r.2
for
123061495
tae-r.2
for
123060957
tae-r.2
for
123069553
hvu-r.1
for
123443894
hvu-r.1
for
123443386
sbi-r.1
for
8071198
sbi-r.1
for
8084837
sbi-r.1
for
8072412
bdi-r.1
for
100845988
bdi-r.1
for
100836436
cre-r.1
for
CHLRE_05g248200v5


Ortholog ID: 1933
Species ghi ghi ath ath ath bra bra bra bna bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107924559 LOC107910932 AT3G61680 AT3G62590 AT1G02660 LOC103862815 LOC103843744 LOC103842065 LOC106451985 LOC125577222 LOC106368524 LOC102614506 LOC102623993 LOC100780077 LOC100790575 LOC100256908 LOC100267577 LOC7478864 LOC7497244 LOC11414891 LOC11428748 LOC101245704 LOC101246277 LOC102604741 LOC102605002 LOC107760325 LOC107766701 LOC107772181 LOC9271679 LOC4327707 LOC100383317 LOC100304295 LOC109939482 LOC123069553 LOC123078582 LOC123078041 LOC123443894 LOC123443386 LOC8071198 LOC8084837 LOC8072412 LOC100845988 LOC100836436 CHLRE_05g248200v5
Function* phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP2, chloroplastic alpha/beta-Hydrolases superfamily protein alpha/beta-Hydrolases superfamily protein alpha/beta-Hydrolases superfamily protein phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP3, chloroplastic phospholipase A1 PLIP3, chloroplastic-like phospholipase A1 PLIP2, chloroplastic-like phospholipase A1 PLIP3, chloroplastic-like phospholipase A1 PLIP1, chloroplastic hypothetical protein phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP2, chloroplastic uncharacterized LOC102604741 uncharacterized LOC102605002 phospholipase A1 PLIP1, chloroplastic-like phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP3, chloroplastic alpha/beta-Hydrolases superfamily protein uncharacterized LOC100304295 phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP2, chloroplastic phospholipase A1 PLIP1, chloroplastic phospholipase A1 PLIP3, chloroplastic phospholipase A1 PLIP1, chloroplastic-like phospholipase A1 PLIP2, chloroplastic-like uncharacterized LOC8071198 uncharacterized LOC8084837 uncharacterized LOC8072412 uncharacterized LOC100845988 uncharacterized LOC100836436 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04082 Neuroactive ligand signaling 4
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath00061 Fatty acid biosynthesis 3
ath01212 Fatty acid metabolism 3
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00073 Cutin, suberine and wax biosynthesis 4
bra00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
bna00440 Phosphonate and phosphinate metabolism 6
bna00564 Glycerophospholipid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 6
bna00440 Phosphonate and phosphinate metabolism 6
bna00564 Glycerophospholipid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00270 Cysteine and methionine metabolism 2
cit00460 Cyanoamino acid metabolism 2
cit00920 Sulfur metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 7
gma00620 Pyruvate metabolism 5
gma00640 Propanoate metabolism 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 5
gma00640 Propanoate metabolism 5
gma01200 Carbon metabolism 5
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
mtr00071 Fatty acid degradation 2
mtr00061 Fatty acid biosynthesis 2
mtr01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00062 Fatty acid elongation 5
sot04626 Plant-pathogen interaction 5
sot04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 9
nta00100 Steroid biosynthesis 3
nta00561 Glycerolipid metabolism 3
nta00564 Glycerophospholipid metabolism 3
nta00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04626 Plant-pathogen interaction 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00010 Glycolysis / Gluconeogenesis 5
osa00620 Pyruvate metabolism 5
osa01200 Carbon metabolism 5
osa00020 Citrate cycle (TCA cycle) 4
osa00785 Lipoic acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 2
osa00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00062 Fatty acid elongation 3
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00062 Fatty acid elongation 4
bdi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 4
bdi00640 Propanoate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924559 107910932 825341 825433 839544 103862815 103843744 103842065 106451985 125577222 106368524 102614506 102623993 100780077 100790575 100256908 100267577 7478864 7497244 11414891 11428748 101245704 101246277 102604741 102605002 107760325 107766701 107772181 9271679 4327707 100383317 100304295 109939482 123069553 123078582 123078041 123443894 123443386 8071198 8084837 8072412 100845988 100836436 66053511
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