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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107943940   nudix hydrolase 3 
 ath-u.5   NUDT3   nudix hydrolase homolog 3 
 gma-u.5   100783900   nudix hydrolase 3 
 vvi-u.5   100241564   nudix hydrolase 3 
 ppo-u.5   7493250   nudix hydrolase 3 
 mtr-u.5   25490488   nudix hydrolase 3 
 sly-u.5   IDI3   isopentenyl diphosphate isomerase 
 osa-u.5   4330987   nudix hydrolase 3 
 zma-u.5   103654182   nudix hydrolase 3 

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Top 50 coexpressed genes to 107943940 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107943940 (ghi-r.1 coexpression data)

CoexMap"107943940"


ghiLOC107943940 | Entrez gene ID : 107943940    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009240 [list] [network] isopentenyl diphosphate biosynthetic process  (28 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0004452 [list] [network] isopentenyl-diphosphate delta-isomerase activity  (4 genes)  IEA  
Protein XP_016733249.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto_nucl 3,  chlo 2,  mito 2,  chlo_mito 2  (predict for XP_016733249.1)
Subcellular
localization
TargetP
scret 7,  mito 4  (predict for XP_016733249.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107943940

.
ath-u.5
for
NUDT3

.
gma-u.5
for
100783900

.
vvi-u.5
for
100241564

.
ppo-u.5
for
7493250

.
mtr-u.5
for
25490488

.
sly-u.5
for
IDI3

.
osa-u.5
for
4330987

.
zma-u.5
for
103654182

.


Ortholog ID: 7099
Species ath gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol NUDT3 LOC100783900 IDI3 LOC4330987 LOC103654182 LOC103832438 LOC103830469 LOC100241564 LOC7493250 LOC25490488 LOC123145876 LOC123128740 LOC123406275 LOC107930370 LOC107943940 LOC106354803 LOC106406347 CHLRE_08g381800v5 LOC8081974 LOC102578826 LOC102621548 LOC100825307 LOC107770936 LOC107760629
Function* nudix hydrolase homolog 3 nudix hydrolase 3 isopentenyl diphosphate isomerase nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 uncharacterized protein nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3 nudix hydrolase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath00970 Aminoacyl-tRNA biosynthesis 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00190 Oxidative phosphorylation 2
gma00053 Ascorbate and aldarate metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 3
sly00220 Arginine biosynthesis 2
sly01210 2-Oxocarboxylic acid metabolism 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00380 Tryptophan metabolism 6
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
vvi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 7
ppo00460 Cyanoamino acid metabolism 2
ppo00500 Starch and sucrose metabolism 2
ppo00999 Biosynthesis of various plant secondary metabolites 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03420 Nucleotide excision repair 3
mtr04120 Ubiquitin mediated proteolysis 3
mtr03083 Polycomb repressive complex 3
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 5
tae01212 Fatty acid metabolism 5
tae00592 alpha-Linolenic acid metabolism 4
tae04146 Peroxisome 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00071 Fatty acid degradation 2
tae00592 alpha-Linolenic acid metabolism 2
tae01200 Carbon metabolism 2
tae01212 Fatty acid metabolism 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 5
hvu00020 Citrate cycle (TCA cycle) 4
hvu04144 Endocytosis 3
hvu01210 2-Oxocarboxylic acid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 4
ghi00020 Citrate cycle (TCA cycle) 3
ghi00310 Lysine degradation 3
ghi00380 Tryptophan metabolism 3
ghi00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00562 Inositol phosphate metabolism 3
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
sot04146 Peroxisome 2
sot00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 2
cit00500 Starch and sucrose metabolism 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04146 Peroxisome 2
bdi04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844308 100783900 101253517 4330987 103654182 103832438 103830469 100241564 7493250 25490488 123145876 123128740 123406275 107930370 107943940 106354803 106406347 5719851 8081974 102578826 102621548 100825307 107770936 107760629
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