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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107946617   ethylene-responsive transcription factor ERF115 
 ghi-r.1   107912062   ethylene-responsive transcription factor ERF114 
 ghi-r.1   107909512   ethylene-responsive transcription factor ERF113 
 ghi-r.1   121228201   ethylene-responsive transcription factor ERF113 
 ath-u.5   Rap2.6L   uncharacterized protein 
 bra-r.6   103856843   ethylene-responsive transcription factor ERF115 
 bra-r.6   103856012   ethylene-responsive transcription factor ERF113 
 bna-r.1   125597216   ethylene-responsive transcription factor ERF114-like 
 bna-r.1   111201490   ethylene-responsive transcription factor ERF113 
 cit-r.1   102620304   ethylene-responsive transcription factor ERF113 
 cit-r.1   102624871   ethylene-responsive transcription factor ERF114-like 
 cit-r.1   102629317   ethylene-responsive transcription factor ERF114 
 gma-u.5   100796480   uncharacterized LOC100796480 
 gma-u.5   100793410   ethylene-responsive transcription factor ERF114 
 gma-u.5   100787091   ethylene-responsive transcription factor ERF114 
 vvi-u.5   100245655   ethylene-responsive transcription factor ERF113 
 vvi-u.5   100250476   ethylene-responsive transcription factor ERF113 
 vvi-u.5   100266913   ethylene-responsive transcription factor ERF113 
 ppo-u.5   7482822   ethylene-responsive transcription factor ERF113 
 ppo-u.5   7481177   ethylene-responsive transcription factor ERF113 
 ppo-u.5   7484341   ethylene-responsive transcription factor ERF113 
 mtr-u.5   11438832   ethylene-responsive transcription factor ERF113 
 mtr-u.5   11443305   ethylene-responsive transcription factor ERF113 
 mtr-u.5   25495900   ethylene-responsive transcription factor ERF113 
 sly-u.5   ERF-D9   ethylene response factor D.9 
 sot-r.1   102578712   ethylene-responsive transcription factor ERF114 
 sot-r.1   102605510   ethylene-responsive transcription factor ERF114-like 
 nta-r.1   107822779   uncharacterized LOC107822779 
 osa-u.5   107278754   ethylene-responsive transcription factor ERF110 
 zma-u.5   103646542   uncharacterized LOC103646542 
 zma-u.5   103630419   ethylene-responsive transcription factor ABR1 
 zma-u.5   100275504   Ethylene-responsive transcription factor ABR1 
 tae-r.2   123149409   ethylene-responsive transcription factor ERF110 
 tae-r.2   123093236   ethylene-responsive transcription factor ERF110-like 
 tae-r.2   123053183   ethylene-responsive transcription factor ERF113 
 hvu-r.1   123415708   ethylene-responsive transcription factor ERF110-like 
 hvu-r.1   123396914   ethylene-responsive transcription factor ERF110-like 
 hvu-r.1   123412843   ethylene-responsive transcription factor RAP2-6-like 
 sbi-r.1   8060591   ethylene-responsive transcription factor ERF113 
 sbi-r.1   8070848   ethylene-responsive transcription factor ERF115 
 sbi-r.1   8056800   ethylene-responsive transcription factor ERF113 
 bdi-r.1   100842811   ethylene-responsive transcription factor ERF113 
 bdi-r.1   100822735   ethylene-responsive transcription factor ERF110 
 bdi-r.1   100844898   ethylene-responsive transcription factor 8 

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Top 50 coexpressed genes to 107946617 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107946617 (ghi-r.1 coexpression data)

CoexMap"107946617"


ghiLOC107946617 | Entrez gene ID : 107946617    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 2 3 3 3 3 3 1 2 1 1 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009873 [list] [network] ethylene-activated signaling pathway  (160 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016736513.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016736513.2)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_016736513.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107946617
ghi-r.1
for
107912062
ghi-r.1
for
107909512
ghi-r.1
for
121228201
ath-u.5
for
Rap2.6L
bra-r.6
for
103856843
bra-r.6
for
103856012
bna-r.1
for
125597216
bna-r.1
for
111201490
cit-r.1
for
102620304
cit-r.1
for
102624871
cit-r.1
for
102629317
gma-u.5
for
100796480
gma-u.5
for
100793410
gma-u.5
for
100787091
vvi-u.5
for
100245655
vvi-u.5
for
100250476
vvi-u.5
for
100266913
ppo-u.5
for
7482822
ppo-u.5
for
7481177
ppo-u.5
for
7484341
mtr-u.5
for
11438832
mtr-u.5
for
11443305
mtr-u.5
for
25495900
sly-u.5
for
ERF-D9
sot-r.1
for
102578712
sot-r.1
for
102605510
nta-r.1
for
107822779
osa-u.5
for
107278754
zma-u.5
for
103646542
zma-u.5
for
103630419
zma-u.5
for
100275504
tae-r.2
for
123149409
tae-r.2
for
123093236
tae-r.2
for
123053183
hvu-r.1
for
123415708
hvu-r.1
for
123396914
hvu-r.1
for
123412843
sbi-r.1
for
8060591
sbi-r.1
for
8070848
sbi-r.1
for
8056800
bdi-r.1
for
100842811
bdi-r.1
for
100822735
bdi-r.1
for
100844898


Ortholog ID: 779
Species ghi ghi ghi ath bra bra bra bna bna cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sot sot nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi
Symbol LOC107946617 LOC107912062 LOC107946887 Rap2.6L LOC103856012 LOC103854964 LOC103850861 LOC125597216 LOC106409736 LOC102620304 LOC102624871 LOC102629317 LOC100796480 LOC100793410 LOC100500531 LOC100245655 LOC100250476 LOC100266913 LOC7482822 LOC7481177 LOC7484341 LOC11443305 LOC25495900 LOC11434091 ERF-D9 LOC102578712 LOC102605510 LOC107773732 LOC107815189 LOC4335707 LOC9268751 LOC103646542 LOC103630419 LOC100275504 LOC123149409 LOC123161119 LOC123189098 LOC123396914 LOC123412843 LOC123430232 LOC8060591 LOC8070848 LOC100842811 LOC100844898 LOC104584778
Function* ethylene-responsive transcription factor ERF115 ethylene-responsive transcription factor ERF114 ethylene-responsive transcription factor ERF114 uncharacterized protein ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF114 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF114-like ethylene-responsive transcription factor ERF113-like ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF114-like ethylene-responsive transcription factor ERF114 uncharacterized LOC100796480 ethylene-responsive transcription factor ERF114 AP2-EREBP transcription factor ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF114 ethylene response factor D.9 ethylene-responsive transcription factor ERF114 ethylene-responsive transcription factor ERF114-like ethylene-responsive transcription factor ERF113-like ethylene-responsive transcription factor ERF113-like ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ABR1 uncharacterized LOC103646542 ethylene-responsive transcription factor ABR1 Ethylene-responsive transcription factor ABR1 ethylene-responsive transcription factor ERF110 ethylene-responsive transcription factor RAP2-6 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF110-like ethylene-responsive transcription factor RAP2-6-like ethylene-responsive transcription factor ERF113-like ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor ERF115 ethylene-responsive transcription factor ERF113 ethylene-responsive transcription factor 8 ethylene-responsive transcription factor ABR1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
ghi00906 Carotenoid biosynthesis 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
ghi00906 Carotenoid biosynthesis 2
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 3
gma00920 Sulfur metabolism 3
gma00270 Cysteine and methionine metabolism 3
gma00670 One carbon pool by folate 2
gma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
gma00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04016 MAPK signaling pathway - plant 5
gma04626 Plant-pathogen interaction 5
gma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00940 Phenylpropanoid biosynthesis 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
mtr00350 Tyrosine metabolism 4
mtr00360 Phenylalanine metabolism 4
mtr01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00250 Alanine, aspartate and glutamate metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi04075 Plant hormone signal transduction 5
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00280 Valine, leucine and isoleucine degradation 5
bdi00640 Propanoate metabolism 2
bdi00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 5
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 3
bdi04626 Plant-pathogen interaction 2
bdi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107946617 107912062 107946887 831174 103856012 103854964 103850861 125597216 106409736 102620304 102624871 102629317 100796480 100793410 100500531 100245655 100250476 100266913 7482822 7481177 7484341 11443305 25495900 11434091 101264530 102578712 102605510 107773732 107815189 4335707 9268751 103646542 103630419 100275504 123149409 123161119 123189098 123396914 123412843 123430232 8060591 8070848 100842811 100844898 104584778
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