ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107948649	uncharacterized LOC107948649
ath-u.5	AT4G21700	DUF2921 family protein, putative (DUF2921)
gma-u.5	100812795	uncharacterized LOC100812795
gma-u.5	102664055	uncharacterized LOC102664055
gma-u.5	102664702	uncharacterized LOC102664702
vvi-u.5	100267446	uncharacterized LOC100267446
ppo-u.5	18096929	uncharacterized LOC18096929
ppo-u.5	18103022	uncharacterized LOC18103022
mtr-u.5	11446805	uncharacterized LOC11446805
mtr-u.5	120578406	uncharacterized LOC120578406
mtr-u.5	25487343	uncharacterized LOC25487343
sly-u.5	104646031	uncharacterized LOC104646031
osa-u.5	4339578	uncharacterized LOC4339578
osa-u.5	4325269	uncharacterized LOC4325269
zma-u.5	103651357	uncharacterized LOC103651357
zma-u.5	100277895	uncharacterized LOC100277895

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(14879 genes)

IEA

GO MF

Protein

XP_040966753.1 [sequence] [blastp]
XP_040966754.1 [sequence] [blastp]
XP_040966755.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, chlo 1, nucl 1, cyto 1, mito 1, extr 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_040966753.1)
plas 4, chlo 1, nucl 1, cyto 1, mito 1, extr 1, vacu 1, E.R. 1, golg 1, cyto_nucl 1, chlo_mito 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_040966754.1)
cyto 3, extr 2, cyto_nucl 2, nucl 1, mito 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_040966755.1)

Subcellular
localization
TargetP

scret 9	(predict for XP_040966753.1)
scret 9	(predict for XP_040966754.1)
scret 9	(predict for XP_040966755.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107948649	ath-u.5 for AT4G21700	gma-u.5 for 100812795	gma-u.5 for 102664055	gma-u.5 for 102664702	vvi-u.5 for 100267446	ppo-u.5 for 18096929	ppo-u.5 for 18103022	mtr-u.5 for 11446805	mtr-u.5 for 120578406	mtr-u.5 for 25487343	sly-u.5 for 104646031	osa-u.5 for 4339578	osa-u.5 for 4325269	zma-u.5 for 103651357	zma-u.5 for 100277895

Ortholog

Ortholog ID: 1669

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107902220

uncharacterized LOC107902222

DUF2921 family protein, putative (DUF2921)

uncharacterized LOC103859300

uncharacterized LOC106439965

uncharacterized LOC111214055

uncharacterized LOC127899941

uncharacterized LOC100786009

uncharacterized LOC100250261

uncharacterized LOC18096929

uncharacterized LOC18103022

uncharacterized LOC11446805

uncharacterized LOC120578406

uncharacterized LOC104646031

uncharacterized LOC107060606

uncharacterized LOC107811491

uncharacterized LOC107818476

uncharacterized LOC4339578

uncharacterized LOC4325269

uncharacterized LOC103651357

uncharacterized LOC100277895

uncharacterized LOC123078988

uncharacterized LOC123449806

uncharacterized LOC123440093

uncharacterized LOC8074576

uncharacterized LOC8061856

uncharacterized LOC106866218

uncharacterized LOC100836458

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03250	Viral life cycle - HIV-1	2
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2
ghi00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	6
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04144	Endocytosis	6
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04141	Protein processing in endoplasmic reticulum	5
zma00510	N-Glycan biosynthesis	5
zma00513	Various types of N-glycan biosynthesis	3
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00010	Glycolysis / Gluconeogenesis	4
hvu00020	Citrate cycle (TCA cycle)	4
hvu00620	Pyruvate metabolism	4
hvu00785	Lipoic acid metabolism	4
hvu01200	Carbon metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2
bdi04144	Endocytosis	2
bdi04142	Lysosome	2

Expression

Expression pattern

Entrez Gene ID^*

107902220

107902222

828257

103859300

106439965

111214055

127899941

100786009

100250261

18096929

18103022

11446805

120578406

104646031

107060606

107811491

107818476

4339578

4325269

103651357

100277895

123078988

123449806

123440093

8074576

8061856

106866218

100836458

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107948649 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107948649 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	1	3	1	2	3	1	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107948649 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107948649 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**