ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107948795	uncharacterized LOC107948795
ghi-r.1	107898670	uncharacterized LOC107898670
ghi-r.1	107960332	uncharacterized LOC107960332
ghi-r.1	107955585	uncharacterized LOC107955585
ath-u.5	AT3G14860	NHL domain-containing protein
ath-u.5	AT5G14890	potassium transporter
ath-u.5	AT1G23880	NHL domain-containing protein
bra-r.6	103830885	uncharacterized LOC103830885
bra-r.6	103851236	uncharacterized LOC103851236
bra-r.6	103859595	uncharacterized LOC103859595
bna-r.1	106446501	uncharacterized LOC106446501
bna-r.1	106367580	uncharacterized LOC106367580
cit-r.1	102628107	uncharacterized LOC102628107
cit-r.1	102629403	hypothetical protein
cit-r.1	102628926	uncharacterized LOC102628926
gma-u.5	100799483	uncharacterized LOC100799483
gma-u.5	100797841	uncharacterized LOC100797841
vvi-u.5	100263777	uncharacterized LOC100263777
vvi-u.5	100245328	uncharacterized LOC100245328
vvi-u.5	100243227	uncharacterized LOC100243227
ppo-u.5	7459053	uncharacterized LOC7459053
ppo-u.5	7471489	uncharacterized LOC7471489
ppo-u.5	7472339	uncharacterized LOC7472339
mtr-u.5	25501285	uncharacterized LOC25501285
mtr-u.5	25501282	uncharacterized LOC25501282
mtr-u.5	25495203	uncharacterized LOC25495203
sly-u.5	101246450	uncharacterized LOC101246450
sly-u.5	101247577	uncharacterized LOC101247577
sly-u.5	101255990	uncharacterized LOC101255990
sot-r.1	102584279	uncharacterized LOC102584279
sot-r.1	102586185	uncharacterized LOC102586185
sot-r.1	102585981	uncharacterized LOC102585981
nta-r.1	107805830	uncharacterized LOC107805830
nta-r.1	107773447	uncharacterized LOC107773447
nta-r.1	107783673	uncharacterized LOC107783673
osa-u.5	4330615	uncharacterized LOC4330615
osa-u.5	4345572	uncharacterized LOC4345572
osa-u.5	4340723	uncharacterized LOC4340723
zma-u.5	100276420	uncharacterized LOC100276420
zma-u.5	100276874	uncharacterized LOC100276874
zma-u.5	100381837	NHL domain-containing protein
tae-r.2	123051748	uncharacterized LOC123051748
tae-r.2	123150357	uncharacterized LOC123150357
tae-r.2	123187661	uncharacterized LOC123187661
hvu-r.1	123406157	uncharacterized LOC123406157
hvu-r.1	123411411	uncharacterized LOC123411411
hvu-r.1	123401816	uncharacterized LOC123401816
sbi-r.1	8073549	uncharacterized LOC8073549
sbi-r.1	8073818	uncharacterized LOC8073818
sbi-r.1	8077695	uncharacterized LOC8077695
bdi-r.1	100839308	uncharacterized LOC100839308
bdi-r.1	104584212	uncharacterized LOC104584212
bdi-r.1	100824092	uncharacterized LOC100824092

Top 50 coexpressed genes to 107948795 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107948795 (ghi-r.1 coexpression data)

CoexMap"107948795"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(10797 genes)

IEA

Protein

XP_016738931.1 [sequence] [blastp]
XP_016738932.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, chlo 3, E.R. 1, chlo_mito 1	(predict for XP_016738931.1)
vacu 4, chlo 3, E.R. 1, chlo_mito 1	(predict for XP_016738932.1)

Subcellular
localization
TargetP

scret 8	(predict for XP_016738931.1)
scret 8	(predict for XP_016738932.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107948795	ghi-r.1 for 107898670	ghi-r.1 for 107960332	ghi-r.1 for 107955585	ath-u.5 for AT3G14860	ath-u.5 for AT5G14890	ath-u.5 for AT1G23880	bra-r.6 for 103830885	bra-r.6 for 103851236	bra-r.6 for 103859595	bna-r.1 for 106446501	bna-r.1 for 106367580	cit-r.1 for 102628107	cit-r.1 for 102629403	cit-r.1 for 102628926	gma-u.5 for 100799483	gma-u.5 for 100797841	vvi-u.5 for 100263777	vvi-u.5 for 100245328	vvi-u.5 for 100243227	ppo-u.5 for 7459053	ppo-u.5 for 7471489	ppo-u.5 for 7472339	mtr-u.5 for 25501285	mtr-u.5 for 25501282	mtr-u.5 for 25495203	sly-u.5 for 101246450	sly-u.5 for 101247577	sly-u.5 for 101255990	sot-r.1 for 102584279	sot-r.1 for 102586185	sot-r.1 for 102585981	nta-r.1 for 107805830	nta-r.1 for 107773447	nta-r.1 for 107783673	osa-u.5 for 4330615	osa-u.5 for 4345572	osa-u.5 for 4340723	zma-u.5 for 100276420	zma-u.5 for 100276874	zma-u.5 for 100381837	tae-r.2 for 123051748	tae-r.2 for 123150357	tae-r.2 for 123187661	hvu-r.1 for 123406157	hvu-r.1 for 123411411	hvu-r.1 for 123401816	sbi-r.1 for 8073549	sbi-r.1 for 8073818	sbi-r.1 for 8077695	bdi-r.1 for 100839308	bdi-r.1 for 104584212	bdi-r.1 for 100824092

Ortholog

Ortholog ID: 709

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107898670

uncharacterized LOC107960332

uncharacterized LOC107958576

NHL domain-containing protein

uncharacterized LOC103846452

uncharacterized LOC103831565

RING finger protein nhl-1

uncharacterized LOC106401544

uncharacterized LOC102628107

hypothetical protein

uncharacterized LOC102628926

uncharacterized LOC100797570

uncharacterized LOC100793916

uncharacterized LOC100781836

uncharacterized LOC100245328

uncharacterized LOC100243227

uncharacterized LOC100266244

uncharacterized LOC18106640

uncharacterized LOC18095451

uncharacterized LOC25501285

uncharacterized LOC25501282

uncharacterized LOC11416686

uncharacterized LOC101247577

uncharacterized LOC101255990

uncharacterized LOC101256281

uncharacterized LOC102586185

uncharacterized LOC102585981

uncharacterized LOC102585637

uncharacterized LOC107805830

uncharacterized LOC107773447

uncharacterized LOC107801174

uncharacterized LOC4330615

uncharacterized LOC4345572

uncharacterized LOC4328817

uncharacterized LOC100276874

uncharacterized LOC100384592

uncharacterized LOC100276297

uncharacterized LOC123150357

uncharacterized LOC123156753

uncharacterized LOC123137286

uncharacterized LOC123406157

uncharacterized LOC123401816

uncharacterized LOC123424925

uncharacterized LOC8073549

uncharacterized LOC8073818

uncharacterized LOC8061543

uncharacterized LOC100839308

uncharacterized LOC104584212

uncharacterized LOC100824092

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	3
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00660	C5-Branched dibasic acid metabolism	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	6
bna00564	Glycerophospholipid metabolism	4
bna00565	Ether lipid metabolism	4
bna00053	Ascorbate and aldarate metabolism	2
bna01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04145	Phagosome	2
vvi04517	IgSF CAM signaling	2
vvi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00030	Pentose phosphate pathway	2
ppo01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4
mtr04141	Protein processing in endoplasmic reticulum	3
mtr03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04145	Phagosome	4
sly04517	IgSF CAM signaling	4
sly04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00270	Cysteine and methionine metabolism	2
nta00670	One carbon pool by folate	2
nta04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3
nta00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00100	Steroid biosynthesis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	5
zma01210	2-Oxocarboxylic acid metabolism	4
zma00290	Valine, leucine and isoleucine biosynthesis	3
zma00770	Pantothenate and CoA biosynthesis	3
zma00650	Butanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03020	RNA polymerase	2
hvu03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	6
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2
bdi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2
bdi04145	Phagosome	2

Expression

Expression pattern

Entrez Gene ID^*

107898670

107960332

107958576

838999

839000

843364

103846452

103831565

106401546

106401544

102628107

102629403

102628926

100797570

100793916

100781836

100245328

100243227

100266244

18106640

18095451

25501285

25501282

11416686

101247577

101255990

101256281

102586185

102585981

102585637

107805830

107773447

107801174

4330615

4345572

4328817

100276874

100384592

100276297

123150357

123156753

123137286

123406157

123401816

123424925

8073549

8073818

8061543

100839308

104584212

100824092

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	3	2	3	2	3	3	3	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107948795 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107948795 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**