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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107919012   pectate lyase 
 ghi-r.1   107898714   probable pectate lyase P59 
 ath-u.5   AT2G02720   Pectate lyase family protein 
 ath-u.5   AT3G01270   Pectate lyase family protein 
 ath-u.5   AT5G15110   Pectate lyase family protein 
 bna-r.1   111204301   probable pectate lyase 19 
 bna-r.1   111211070   probable pectate lyase 3 
 bna-r.1   111211421   probable pectate lyase 19 
 cit-r.1   102621878   probable pectate lyase 19 
 gma-u.5   102664159   probable pectate lyase 3 
 gma-u.5   100780236   pectate lyase 
 vvi-u.5   100257069   pectate lyase 
 vvi-u.5   100262177   pectate lyase 
 sly-u.5   LAT59   pectate lyase P59 
 sly-u.5   101257960   pectate lyase-like 
 nta-r.1   107761724   putative pectate lyase P59 
 nta-r.1   107823631   pectate lyase-like 
 osa-u.5   4340103   pectate lyase 
 osa-u.5   4340099   pectate lyase 
 zma-u.5   100284055   uncharacterized LOC100284055 
 zma-u.5   100284356   pectate lyase 
 zma-u.5   107275230   uncharacterized LOC107275230 
 tae-r.2   123160072   pectate lyase 
 tae-r.2   123136954   pectate lyase 
 tae-r.2   123144374   pectate lyase 

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Top 50 coexpressed genes to 107919012 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107919012 (ghi-r.1 coexpression data)

CoexMap"107949925"


ghiLOC107949925 | Entrez gene ID : 107949925    
Species ghi ath bna cit gma vvi sly nta osa zma tae sbi sot mtr bra hvu ppo cre bdi
Paralog 2 3 3 1 2 2 2 2 2 3 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00040 [list] [network] Pentose and glucuronate interconversions (333 genes)
GO BP
GO CC
GO MF
GO:0030570 [list] [network] pectate lyase activity  (83 genes)  IEA  
Protein XP_016740175.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  extr 1,  E.R. 1  (predict for XP_016740175.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_016740175.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107919012
ghi-r.1
for
107898714
ath-u.5
for
AT2G02720
ath-u.5
for
AT3G01270
ath-u.5
for
AT5G15110
bna-r.1
for
111204301
bna-r.1
for
111211070
bna-r.1
for
111211421
cit-r.1
for
102621878
gma-u.5
for
102664159
gma-u.5
for
100780236
vvi-u.5
for
100257069
vvi-u.5
for
100262177
sly-u.5
for
LAT59
sly-u.5
for
101257960
nta-r.1
for
107761724
nta-r.1
for
107823631
osa-u.5
for
4340103
osa-u.5
for
4340099
zma-u.5
for
100284055
zma-u.5
for
100284356
zma-u.5
for
107275230
tae-r.2
for
123160072
tae-r.2
for
123136954
tae-r.2
for
123144374


Ortholog ID: 483
Species ath ath ath bna cit gma gma vvi vvi sly sly sly nta nta nta osa osa zma zma zma tae tae tae
Symbol AT3G01270 AT5G15110 AT59 LOC106416640 LOC102621878 LOC100798579 LOC100810857 LOC100257069 LOC100262177 LAT59 LOC101260096 LOC101264694 LOC107761724 LOC107823631 LOC107788586 LOC4340103 LOC4340099 LOC100284055 LOC100284356 LOC542245 LOC123160072 LOC123127312 LOC123167261
Function* Pectate lyase family protein Pectate lyase family protein Pectate lyase family protein probable pectate lyase 6 probable pectate lyase 19 pectate lyase pectate lyase pectate lyase pectate lyase pectate lyase P59 probable pectate lyase P59 probable pectate lyase P59 putative pectate lyase P59 pectate lyase-like pectate lyase-like pectate lyase pectate lyase uncharacterized LOC100284055 pectate lyase male gametophyte-specific 2 pectate lyase pectate lyase pectate lyase
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00040 Pentose and glucuronate interconversions 4
cit00460 Cyanoamino acid metabolism 3
cit00500 Starch and sucrose metabolism 3
cit00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 4
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00040 Pentose and glucuronate interconversions 5
sly00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 12
nta00053 Ascorbate and aldarate metabolism 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00040 Pentose and glucuronate interconversions 13
nta00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 6
osa04075 Plant hormone signal transduction 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00040 Pentose and glucuronate interconversions 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00040 Pentose and glucuronate interconversions 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 4
tae00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 4
tae00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00040 Pentose and glucuronate interconversions 3
tae00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821142 831363 838004 106416640 102621878 100798579 100810857 100257069 100262177 101253459 101260096 101264694 107761724 107823631 107788586 4340103 4340099 100284055 100284356 542245 123160072 123127312 123167261
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