ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	MSS3	Calcium-binding EF-hand family protein
gma-u.5	100813656	calmodulin-like protein 3
gma-u.5	100810081	calmodulin-like protein
vvi-u.5	100245811	calmodulin-like protein 3
vvi-u.5	100254364	calmodulin-like protein 5
ppo-u.5	18106917	calmodulin-like protein 3
ppo-u.5	7491758	calmodulin-like protein 3
mtr-u.5	11435247	calmodulin-like protein 7
mtr-u.5	11440276	calmodulin-like protein 7
sly-u.5	101253386	calmodulin-like protein 3
sly-u.5	101267131	calmodulin-like protein 3
sly-u.5	101260796	calmodulin-like protein 3
osa-u.5	4336258	probable calcium-binding protein CML22
osa-u.5	9272185	probable calcium-binding protein CML17
zma-u.5	100280813	calmodulin

Annotation

functional annotation

KEGG

ghi04626 [list] [network] Plant-pathogen interaction (623 genes)

GO BP

GO CC

GO MF

GO:0005509 [list] [network] calcium ion binding

(639 genes)

IEA

Protein

XP_016743409.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2

(predict for XP_016743409.1)

Subcellular
localization
TargetP

other 9

(predict for XP_016743409.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for MSS3	gma-u.5 for 100813656	gma-u.5 for 100810081	vvi-u.5 for 100245811	vvi-u.5 for 100254364	ppo-u.5 for 18106917	ppo-u.5 for 7491758	mtr-u.5 for 11435247	mtr-u.5 for 11440276	sly-u.5 for 101253386	sly-u.5 for 101267131	sly-u.5 for 101260796	osa-u.5 for 4336258	osa-u.5 for 9272185	zma-u.5 for 100280813

Ortholog

Ortholog ID: 811

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

calmodulin-like protein 3

EF hand calcium-binding protein family

calmodulin-like protein 3

calmodulin-like protein 6

calmodulin-like protein 7

calmodulin-like protein 3

calmodulin-like protein

calmodulin-like protein 3

calmodulin-like protein 7

calmodulin-like protein 3

probable calcium-binding protein CML17

calmodulin

probable calcium-binding protein CML22

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00040	Pentose and glucuronate interconversions	4
ath04075	Plant hormone signal transduction	2
ath04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04626	Plant-pathogen interaction	6
gma04016	MAPK signaling pathway - plant	2
gma04070	Phosphatidylinositol signaling system	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	3
sly00053	Ascorbate and aldarate metabolism	2
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly01240	Biosynthesis of cofactors	2
sly01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04130	SNARE interactions in vesicular transport	2
nta04145	Phagosome	2
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	4
hvu00062	Fatty acid elongation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	5
sbi00062	Fatty acid elongation	3
sbi00561	Glycerolipid metabolism	2
sbi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2

Expression

Expression pattern

Entrez Gene ID^*

107953683

827993

103859223

106443797

102621558

100813656

100810081

100245811

7459875

18106917

11440276

101253386

102585648

102595634

107766031

9272185

100280813

123041569

123430457

8073712

100838653

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to MSS3 (ath-u.5 coexpression data)

Top 50 enrichment test to MSS3 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	2	2	3	2	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to MSS3 (ath-u.5 coexpression data)

Top 50 enrichment test to MSS3 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**