ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107953461	formin-like protein 20
ghi-r.1	107912122	formin-like protein 20
ghi-r.1	107909118	formin-like protein 14
ghi-r.1	107893432	formin-like protein 13
ath-u.5	AT2G25050	actin-binding FH2 (formin 2) family protein
ath-u.5	AT5G07740	actin binding protein
bra-r.6	103851658	formin-like protein 13
bra-r.6	103855743	formin-like protein 20
bra-r.6	103845249	formin-like protein 13
bna-r.1	125587728	formin-like protein 14
cit-r.1	102626788	formin-like protein 20
cit-r.1	102607623	formin-like protein 14
cit-r.1	102626512	formin-like protein 18
gma-u.5	100785475	formin-like protein 20
gma-u.5	100781274	formin-like protein 14
gma-u.5	100779085	formin-like protein 20
vvi-u.5	100249846	formin-like protein 13
vvi-u.5	100264917	formin-like protein 14
vvi-u.5	100249142	formin-like protein 18
ppo-u.5	18105776	formin-like protein 20
ppo-u.5	18107512	formin-like protein 18
ppo-u.5	7489448	formin-like protein 13
mtr-u.5	11426717	formin-like protein 18
mtr-u.5	25488802	formin-like protein 20
mtr-u.5	11439065	formin-like protein 13
sly-u.5	101259758	formin-like protein 20
sly-u.5	101249436	formin-like protein 18
sly-u.5	101268499	formin-like protein 14
sot-r.1	102594339	formin-like protein 13
sot-r.1	102585462	formin-like protein 14
sot-r.1	102593556	formin-like protein 20
nta-r.1	107782382	formin-like protein 18
nta-r.1	107784550	formin-like protein 14
nta-r.1	107785883	formin-like protein 20
osa-u.5	4330999	formin-like protein 7
osa-u.5	4347999	formin-like protein 3
zma-u.5	103647807	formin-like protein 5
zma-u.5	103633391	formin-like protein 5
zma-u.5	110991262	uncharacterized LOC110991262
tae-r.2	123054053	formin-like protein 3
tae-r.2	123114683	formin-like protein 12
tae-r.2	123180317	formin-like protein 6
hvu-r.1	123427381	formin-like protein 3
hvu-r.1	123425458	formin-like protein 5
hvu-r.1	123418196	formin-like protein 6
sbi-r.1	8077874	formin-like protein 3
sbi-r.1	8081985	formin-like protein 7
sbi-r.1	8074262	formin-like protein 12
bdi-r.1	100825940	formin-like protein 7
bdi-r.1	100837757	formin-like protein 3
bdi-r.1	100833447	formin-like protein 12
cre-r.1	CHLRE_03g166700v5	uncharacterized protein
cre-r.1	CHLRE_06g311250v5	uncharacterized protein

Top 50 coexpressed genes to 107953461 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107953461 (ghi-r.1 coexpression data)

CoexMap"107953461"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016744265.2 [sequence] [blastp]
XP_040953288.1 [sequence] [blastp]
XP_040953289.1 [sequence] [blastp]
XP_040953290.1 [sequence] [blastp]
XP_040953292.1 [sequence] [blastp]
XP_040953293.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, nucl 3, mito 3	(predict for XP_016744265.2)
chlo 4, mito 4, chlo_mito 4	(predict for XP_040953288.1)
chlo 4, mito 4, chlo_mito 4	(predict for XP_040953289.1)
chlo 4, nucl 3, mito 3	(predict for XP_040953290.1)
chlo 4, nucl 3, mito 3	(predict for XP_040953292.1)
mito 6, chlo 1, nucl 1, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1	(predict for XP_040953293.1)

Subcellular
localization
TargetP

mito 7, other 4	(predict for XP_016744265.2)
mito 7, other 4	(predict for XP_040953288.1)
mito 7, other 4	(predict for XP_040953289.1)
mito 7, other 4	(predict for XP_040953290.1)
mito 7, other 4	(predict for XP_040953292.1)
mito 7, other 4	(predict for XP_040953293.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107953461	ghi-r.1 for 107912122	ghi-r.1 for 107909118	ghi-r.1 for 107893432	ath-u.5 for AT2G25050	ath-u.5 for AT5G07740	bra-r.6 for 103851658	bra-r.6 for 103855743	bra-r.6 for 103845249	bna-r.1 for 125587728	cit-r.1 for 102626788	cit-r.1 for 102607623	cit-r.1 for 102626512	gma-u.5 for 100785475	gma-u.5 for 100781274	gma-u.5 for 100779085	vvi-u.5 for 100249846	vvi-u.5 for 100264917	vvi-u.5 for 100249142	ppo-u.5 for 18105776	ppo-u.5 for 18107512	ppo-u.5 for 7489448	mtr-u.5 for 11426717	mtr-u.5 for 25488802	mtr-u.5 for 11439065	sly-u.5 for 101259758	sly-u.5 for 101249436	sly-u.5 for 101268499	sot-r.1 for 102594339	sot-r.1 for 102585462	sot-r.1 for 102593556	nta-r.1 for 107782382	nta-r.1 for 107784550	nta-r.1 for 107785883	osa-u.5 for 4330999	osa-u.5 for 4347999	zma-u.5 for 103647807	zma-u.5 for 103633391	zma-u.5 for 110991262	tae-r.2 for 123054053	tae-r.2 for 123114683	tae-r.2 for 123180317	hvu-r.1 for 123427381	hvu-r.1 for 123425458	hvu-r.1 for 123418196	sbi-r.1 for 8077874	sbi-r.1 for 8081985	sbi-r.1 for 8074262	bdi-r.1 for 100825940	bdi-r.1 for 100837757	bdi-r.1 for 100833447	cre-r.1 for CHLRE_03g166700v5	cre-r.1 for CHLRE_06g311250v5

Ortholog

Ortholog ID: 355

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

AFH14

Function^*

formin-like protein 14

formin-like protein 13

formin-like protein 6

actin binding protein

Formin Homology 14

actin binding protein

formin-like protein 20

formin-like protein 13

formin-like protein 14

formin-like protein 20

formin-like protein 14

formin-like protein 18

formin-like protein 13

formin-like protein 20

formin-like protein 13

formin-like protein 14

formin-like protein 18

formin-like protein 20

formin-like protein 18

formin-like protein 14

formin-like protein 18

formin-like protein 20

formin-like protein 14

formin-like protein 18

formin-like protein 20

formin-like protein 13

formin-like protein 14

formin-like protein 20

formin-like protein 14

formin-like protein 20

formin-like protein 14

formin-like protein 3

formin-like protein 6

formin-like protein 5

formin-like protein 3

formin-like protein 12

formin-like protein 6

formin-like protein 3

uncharacterized LOC123055379

formin-like protein 3

formin-like protein 6

formin-like protein 3

formin-like protein 7

formin-like protein 12

formin-like protein 7

formin-like protein 5

formin-like protein 6

uncharacterized protein

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03018	RNA degradation	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00196	Photosynthesis - antenna proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04120	Ubiquitin mediated proteolysis	5
bna03015	mRNA surveillance pathway	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03013	Nucleocytoplasmic transport	2
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	2
gma04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2
gma00520	Amino sugar and nucleotide sugar metabolism	2
gma01240	Biosynthesis of cofactors	2
gma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	2
mtr00310	Lysine degradation	2
mtr04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03420	Nucleotide excision repair	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2
nta03015	mRNA surveillance pathway	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00906	Carotenoid biosynthesis	3
tae04142	Lysosome	3
tae04120	Ubiquitin mediated proteolysis	3
tae00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03040	Spliceosome	2
bdi03083	Polycomb repressive complex	2
bdi03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03030	DNA replication	5

Expression

Expression pattern

Entrez Gene ID^*

107928334

121218314

107906827

3770686

840068

835928

103855743

103845249

103851657

125587728

106446102

102607623

102626512

102608075

100785475

100779085

100799319

100264917

100249142

100251932

18107512

7491911

7485240

11426717

25493848

25494580

101268499

101245267

101262608

102594339

102585462

102593556

107784550

107807754

107824924

4347999

4340328

103647807

103645263

103652160

123180317

123046169

123055379

123427381

123418196

123411044

8077874

8081985

8074262

100825940

100834057

100832636

5729014

5716789

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	3	1	3	3	3	3	3	3	3	3	2	3	3	3	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107953461 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107953461 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**