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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107953485   protein LONGIFOLIA 1 
 ghi-r.1   121206443   protein LONGIFOLIA 1 
 ghi-r.1   121232092   protein LONGIFOLIA 1 
 ghi-r.1   107931455   protein LONGIFOLIA 2 
 ath-u.5   TRM3   LONGIFOLIA protein 
 ath-u.5   TRM4   LONGIFOLIA protein 
 bra-r.6   103842692   protein LONGIFOLIA 1 
 bra-r.6   103852888   protein LONGIFOLIA 1 
 bra-r.6   103835893   protein LONGIFOLIA 2 
 bna-r.1   106451940   protein LONGIFOLIA 1-like 
 bna-r.1   106415326   protein LONGIFOLIA 1 
 cit-r.1   102610798   protein LONGIFOLIA 1 
 cit-r.1   102629389   protein LONGIFOLIA 1 
 gma-u.5   100787391   protein LONGIFOLIA 2 
 gma-u.5   100805643   protein LONGIFOLIA 2 
 gma-u.5   100809978   protein LONGIFOLIA 1 
 vvi-u.5   100253543   protein LONGIFOLIA 1 
 vvi-u.5   100266999   protein LONGIFOLIA 1 
 ppo-u.5   18105756   protein LONGIFOLIA 1 
 ppo-u.5   7487104   protein LONGIFOLIA 1 
 ppo-u.5   7484578   protein LONGIFOLIA 1 
 mtr-u.5   25488714   protein LONGIFOLIA 1 
 sly-u.5   TRM1/2/3/4/5   TONNEAU1 recruiting motif 1/2/3/4/5 
 sly-u.5   TRM3/4   TONNEAU1 recruiting motif 3/4 
 sot-r.1   102579668   protein LONGIFOLIA 1 
 sot-r.1   102587798   protein LONGIFOLIA 2 
 nta-r.1   107797922   protein LONGIFOLIA 1-like 
 nta-r.1   107831982   protein LONGIFOLIA 1 
 nta-r.1   107810763   protein LONGIFOLIA 1 
 osa-u.5   4342218   protein LONGIFOLIA 1 
 zma-u.5   103647243   protein LONGIFOLIA 1 
 zma-u.5   100279500   uncharacterized LOC100279500 
 tae-r.2   123188851   protein LONGIFOLIA 1 
 tae-r.2   123052953   protein LONGIFOLIA 1 
 tae-r.2   123045116   protein LONGIFOLIA 1 
 hvu-r.1   123426359   protein LONGIFOLIA 1-like 
 sbi-r.1   8063864   protein LONGIFOLIA 1 
 bdi-r.1   100845831   protein LONGIFOLIA 1 

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Top 50 coexpressed genes to 107953485 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107953485 (ghi-r.1 coexpression data)

CoexMap"107953485"


ghiLOC107953485 | Entrez gene ID : 107953485    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 2 2 3 2 3 1 2 2 3 1 2 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0051513 [list] [network] regulation of monopolar cell growth  (13 genes)  IEA  
GO CC
GO MF
Protein XP_016744295.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016744295.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016744295.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107953485
ghi-r.1
for
121206443
ghi-r.1
for
121232092
ghi-r.1
for
107931455
ath-u.5
for
TRM3
ath-u.5
for
TRM4
bra-r.6
for
103842692
bra-r.6
for
103852888
bra-r.6
for
103835893
bna-r.1
for
106451940
bna-r.1
for
106415326
cit-r.1
for
102610798
cit-r.1
for
102629389
gma-u.5
for
100787391
gma-u.5
for
100805643
gma-u.5
for
100809978
vvi-u.5
for
100253543
vvi-u.5
for
100266999
ppo-u.5
for
18105756
ppo-u.5
for
7487104
ppo-u.5
for
7484578
mtr-u.5
for
25488714
sly-u.5
for
TRM1/2/3/4/5
sly-u.5
for
TRM3/4
sot-r.1
for
102579668
sot-r.1
for
102587798
nta-r.1
for
107797922
nta-r.1
for
107831982
nta-r.1
for
107810763
osa-u.5
for
4342218
zma-u.5
for
103647243
zma-u.5
for
100279500
tae-r.2
for
123188851
tae-r.2
for
123052953
tae-r.2
for
123045116
hvu-r.1
for
123426359
sbi-r.1
for
8063864
bdi-r.1
for
100845831


Ortholog ID: 4149
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC107953485 LOC121206443 LOC107931455 TRM3 TRM4 LOC103842692 LOC103852888 LOC103835893 LOC106381368 LOC106361987 LOC106369062 LOC102610798 LOC102629389 LOC100787391 LOC100805643 LOC100775311 LOC100253543 LOC100266999 LOC18105756 LOC7487104 LOC7484578 LOC25488714 TRM1/2/3/4/5 TRM3/4 LOC102579668 LOC102587798 LOC107797922 LOC107831982 LOC107763080 LOC4342218 LOC103647243 LOC100279500 LOC123188851 LOC123052953 LOC123045116 LOC123426359 LOC8063864 LOC100845831
Function* protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 2 LONGIFOLIA protein LONGIFOLIA protein protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 2 protein LONGIFOLIA 1-like protein LONGIFOLIA 2 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 2 protein LONGIFOLIA 2 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 TONNEAU1 recruiting motif 1/2/3/4/5 TONNEAU1 recruiting motif 3/4 protein LONGIFOLIA 1 protein LONGIFOLIA 2 protein LONGIFOLIA 1-like protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 uncharacterized LOC100279500 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1 protein LONGIFOLIA 1-like protein LONGIFOLIA 1 protein LONGIFOLIA 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00730 Thiamine metabolism 2
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00730 Thiamine metabolism 2
bra00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03410 Base excision repair 3
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 6
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 3
hvu04145 Phagosome 2
hvu04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00460 Cyanoamino acid metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107953485 121206443 107931455 838443 843756 103842692 103852888 103835893 106381368 106361987 106369062 102610798 102629389 100787391 100805643 100775311 100253543 100266999 18105756 7487104 7484578 25488714 101262175 101257254 102579668 102587798 107797922 107831982 107763080 4342218 103647243 100279500 123188851 123052953 123045116 123426359 8063864 100845831
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