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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107954262   ATP-dependent RNA helicase DEAH13 
 ath-u.5   FAS4   RNA helicase family protein 
 gma-u.5   100788201   ATP-dependent RNA helicase DEAH13 
 gma-u.5   100782767   ATP-dependent RNA helicase DEAH13 
 vvi-u.5   100262427   ATP-dependent RNA helicase DEAH13 
 ppo-u.5   7487803   ATP-dependent RNA helicase DEAH13 
 mtr-u.5   11424352   ATP-dependent RNA helicase DEAH13 
 mtr-u.5   11411690   ATP-dependent RNA helicase DEAH13 
 sly-u.5   101245407   ATP-dependent RNA helicase DEAH13 
 osa-u.5   4330659   ATP-dependent RNA helicase DEAH13 
 zma-u.5   103627696   ATP-dependent RNA helicase DEAH13 

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Top 50 coexpressed genes to 107954262 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954262 (ghi-r.1 coexpression data)

CoexMap"107954262"


ghiLOC107954262 | Entrez gene ID : 107954262    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (83 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (469 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (21132 genes)  IEA  
GO MF
GO:0004386 [list] [network] helicase activity  (292 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016745258.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016745258.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016745258.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107954262
ath-u.5
for
FAS4
gma-u.5
for
100788201
gma-u.5
for
100782767
vvi-u.5
for
100262427
ppo-u.5
for
7487803
mtr-u.5
for
11424352
mtr-u.5
for
11411690
sly-u.5
for
101245407
osa-u.5
for
4330659
zma-u.5
for
103627696


Ortholog ID: 7829
Species ghi ghi ath bra bna bna cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae hvu hvu bdi cre
Symbol LOC107954262 LOC107953052 FAS4 LOC103854246 LOC106375492 LOC106401920 LOC102620556 LOC100782767 LOC100788201 LOC100262427 LOC7487803 LOC11424352 LOC11411690 LOC101245407 LOC102604659 LOC107829563 LOC107770815 LOC4330659 LOC103627696 LOC123128330 LOC123136894 LOC123401906 LOC123425789 LOC100831565 CHLRE_07g352251v5
Function* ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 RNA helicase family protein ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 probable ATP-dependent RNA helicase DHX37 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13 ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13-like ATP-dependent RNA helicase DEAH13 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03082 ATP-dependent chromatin remodeling 2
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 3
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954262 107953052 840232 103854246 106375492 106401920 102620556 100782767 100788201 100262427 7487803 11424352 11411690 101245407 102604659 107829563 107770815 4330659 103627696 123128330 123136894 123401906 123425789 100831565 5718080
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